Os02g0448400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Synaptotagmin C.
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Os02g0448400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Synaptotagmin C.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76 | 0.41 | 11.5 | -0.911 | 0.856 | -1.08 | -0.487 | -0.933 | -0.168 | 12.4 | 49 | 1282 | -- | -- |
| 77.39 | 0.41 | 11.5 | -0.969 | 0.842 | -1.11 | -0.632 | -- | -0.161 | 12.4 | 47.28 | 1289 | -- | -- |
| 76.88 | 0.408 | 11.5 | -0.912 | 0.911 | -1.12 | -- | -1.21 | -0.165 | 12.4 | 49.02 | 1229 | -- | -- |
| 78.77 | 0.413 | 11.5 | -1.03 | 0.841 | -1.14 | -- | -- | -0.184 | 12.5 | 48 | 1292 | -- | -- |
| 105.25 | 0.478 | 11.5 | -1.07 | -- | -1.14 | -- | -0.42 | -0.237 | -- | 48.84 | 1634 | -- | -- |
| 106.42 | 0.484 | 11.5 | -0.935 | 0.675 | -- | -0.788 | -- | -0.142 | 12 | -- | -- | -- | -- |
| 109.11 | 0.489 | 11.5 | -0.966 | 0.679 | -- | -- | -- | -0.145 | 12.1 | -- | -- | -- | -- |
| 105.07 | 0.477 | 11.5 | -1.03 | -- | -1.16 | -- | -- | -0.201 | -- | 49 | 1624 | -- | -- |
| 106.66 | 0.481 | 11.5 | -- | 0.836 | -1.09 | -- | -- | -0.0817 | 12.5 | 53.08 | 1307 | -- | -- |
| 138.09 | 0.549 | 11.5 | -0.987 | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
| 133.68 | 0.541 | 11.5 | -- | 0.692 | -- | -- | -- | -0.0372 | 12.2 | -- | -- | -- | -- |
| 131.3 | 0.534 | 11.5 | -- | -- | -1.46 | -- | -- | -0.233 | -- | 70.65 | 1623 | -- | -- |
| 163.8 | 0.597 | 11.5 | -- | -- | -- | -- | -- | -0.0451 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.51 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 3 | 73.80 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 9 | 73.93 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 14 | 73.94 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 16 | 74.03 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 18 | 74.05 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 85 | 75.26 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 98 | 75.52 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 112 | 75.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 136 | 75.91 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 154 | 76.03 | humidity | 50 | 1440 | > th | dose dependent | sin | 18 | NA |
| 157 | 76.04 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 176 | 76.05 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 193 | 76.09 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 252 | 76.33 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 22 |
| 282 | 76.42 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 22 |
| 292 | 76.45 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 17 |
| 311 | 76.47 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 379 | 76.68 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 466 | 76.87 | humidity | 70 | 1440 | > th | dose independent | sin | 15 | NA |
| 490 | 76.91 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 525 | 76.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 526 | 76.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 548 | 77.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 564 | 77.05 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 583 | 77.08 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 635 | 77.20 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 636 | 77.20 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 666 | 77.26 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 678 | 77.28 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 695 | 77.29 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 707 | 77.31 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 711 | 77.32 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 730 | 77.35 | humidity | 70 | 1440 | < th | dose independent | sin | 15 | NA |
| 933 | 77.81 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |