Os02g0446100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0446100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.78 | 0.44 | 3.3 | 0.179 | 0.238 | -0.326 | 0.00877 | -0.34 | 0.125 | 7.14 | 1014 | 7288 | -- | -- |
| 88.2 | 0.437 | 3.29 | 0.261 | 0.236 | -0.298 | -0.0184 | -- | 0.138 | 7.02 | 1014 | 7291 | -- | -- |
| 87.77 | 0.436 | 3.3 | 0.186 | 0.247 | -0.321 | -- | -0.316 | 0.124 | 7.15 | 1014 | 7293 | -- | -- |
| 88.17 | 0.437 | 3.29 | 0.277 | 0.238 | -0.311 | -- | -- | 0.15 | 7.16 | 1014 | 7291 | -- | -- |
| 90.73 | 0.444 | 3.31 | 0.184 | -- | -0.302 | -- | -0.285 | 0.13 | -- | 1015 | 7321 | -- | -- |
| 92.6 | 0.451 | 3.31 | 0.155 | 0.234 | -- | 0.0121 | -- | 0.0747 | 7.13 | -- | -- | -- | -- |
| 92.6 | 0.451 | 3.31 | 0.155 | 0.234 | -- | -- | -- | 0.0746 | 7.14 | -- | -- | -- | -- |
| 91.16 | 0.445 | 3.3 | 0.281 | -- | -0.308 | -- | -- | 0.154 | -- | 1015 | 7322 | -- | -- |
| 89.9 | 0.442 | 3.3 | -- | 0.239 | -0.253 | -- | -- | 0.114 | 7.06 | 1014 | 10493 | -- | -- |
| 95.49 | 0.457 | 3.31 | 0.159 | -- | -- | -- | -- | 0.0788 | -- | -- | -- | -- | -- |
| 93.23 | 0.452 | 3.31 | -- | 0.236 | -- | -- | -- | 0.0574 | 7.09 | -- | -- | -- | -- |
| 92.89 | 0.449 | 3.31 | -- | -- | -0.247 | -- | -- | 0.117 | -- | 1014 | 10520 | -- | -- |
| 96.15 | 0.458 | 3.32 | -- | -- | -- | -- | -- | 0.0611 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.55 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 75.56 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 8 | 81.18 | wind | 5.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 11 | 81.66 | wind | 5.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 120 | 84.66 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 1 |
| 121 | 84.66 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 164 | 86.14 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 170 | 86.23 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 176 | 86.29 | temperature | 20.0 | 30 | < th | dose independent | rect. | 2 | 2 |
| 181 | 86.31 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 192 | 86.38 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 195 | 86.39 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 214 | 86.54 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 238 | 86.72 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 244 | 86.86 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 249 | 86.91 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 2 |
| 250 | 86.91 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 277 | 87.19 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 280 | 87.22 | wind | 5.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 285 | 87.25 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 291 | 87.32 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 10 | 4 |
| 333 | 87.46 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 372 | 87.63 | wind | 3.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 375 | 87.63 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 7 |
| 390 | 87.66 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 410 | 87.71 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 19 | 6 |
| 445 | 87.79 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 4 |
| 452 | 87.80 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 477 | 87.81 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 568 | 87.90 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 590 | 87.94 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 591 | 87.94 | wind | 3.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 631 | 87.96 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 6 | NA |
| 632 | 87.96 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 658 | 87.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 677 | 88.01 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 702 | 88.01 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 729 | 88.03 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 3 | 10 |
| 731 | 88.03 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 24 | 13 |
| 735 | 88.04 | temperature | 20.0 | 30 | > th | dose independent | rect. | 23 | 8 |
| 740 | 88.04 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 6 |
| 757 | 88.05 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 9 |
| 761 | 88.06 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 800 | 88.08 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 802 | 88.08 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 881 | 88.12 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 890 | 88.13 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 909 | 88.14 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 6 | NA |
| 951 | 88.16 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 10 | 12 |
| 969 | 88.17 | humidity | 60.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 974 | 88.17 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 10 | 12 |
| 977 | 88.17 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |