Os02g0445700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0445700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.91 | 0.396 | 10.6 | -1.52 | 0.678 | -0.745 | 0.102 | -1.98 | 0.52 | 1.01 | 86.78 | 7546 | -- | -- |
| 76.23 | 0.407 | 10.6 | -1.38 | 0.661 | -0.836 | 0.158 | -- | 0.514 | 1.06 | 82.21 | 7420 | -- | -- |
| 70.91 | 0.392 | 10.6 | -1.51 | 0.679 | -0.741 | -- | -1.98 | 0.517 | 0.949 | 85.85 | 7587 | -- | -- |
| 76.27 | 0.407 | 10.6 | -1.37 | 0.665 | -0.822 | -- | -- | 0.523 | 1.05 | 82.6 | 7420 | -- | -- |
| 89.42 | 0.443 | 10.7 | -1.25 | -- | -0.934 | -- | -0.58 | 0.377 | -- | 86.62 | 7498 | -- | -- |
| 85.66 | 0.434 | 10.7 | -1.29 | 0.686 | -- | 0.0634 | -- | 0.394 | 1.19 | -- | -- | -- | -- |
| 85.68 | 0.433 | 10.7 | -1.29 | 0.686 | -- | -- | -- | 0.393 | 1.17 | -- | -- | -- | -- |
| 90.02 | 0.444 | 10.7 | -1.28 | -- | -0.967 | -- | -- | 0.413 | -- | 120 | 7458 | -- | -- |
| 112.41 | 0.494 | 10.6 | -- | 0.686 | -0.831 | -- | -- | 0.459 | 0.825 | 39.69 | 5621 | -- | -- |
| 114.78 | 0.501 | 10.7 | -1.26 | -- | -- | -- | -- | 0.407 | -- | -- | -- | -- | -- |
| 129.45 | 0.532 | 10.6 | -- | 0.664 | -- | -- | -- | 0.537 | 1.09 | -- | -- | -- | -- |
| 132.9 | 0.539 | 10.6 | -- | -- | -0.951 | -- | -- | 0.554 | -- | 120 | 7458 | -- | -- |
| 156.82 | 0.585 | 10.6 | -- | -- | -- | -- | -- | 0.547 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.63 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 6 | 72.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 7 | 72.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 8 | 72.28 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 9 | 72.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 11 | 72.31 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 17 | 72.40 | temperature | 30.0 | 270 | < th | dose independent | rect. | 12 | 23 |
| 24 | 72.43 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 25 | 72.46 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 26 | 72.46 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 31 | 72.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 23 |
| 41 | 72.57 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 47 | 72.59 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 51 | 72.60 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 18 |
| 56 | 72.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 57 | 72.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 61 | 72.63 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 18 |
| 62 | 72.63 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 18 |
| 72 | 72.66 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 80 | 72.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 82 | 72.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 83 | 72.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 88 | 72.74 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 89 | 72.74 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 125 | 72.83 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 129 | 72.83 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 150 | 72.86 | temperature | 30.0 | 270 | < th | dose independent | sin | 23 | NA |
| 155 | 72.86 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 190 | 72.94 | humidity | 60.0 | 720 | < th | dose independent | rect. | 12 | 3 |
| 207 | 72.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 210 | 72.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 223 | 73.02 | temperature | 30.0 | 720 | < th | dose independent | sin | 6 | NA |
| 236 | 73.06 | temperature | 30.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 251 | 73.09 | humidity | 60.0 | 720 | < th | dose independent | rect. | 13 | 1 |
| 286 | 73.12 | temperature | 30.0 | 270 | < th | dose independent | no | NA | NA |
| 293 | 73.13 | humidity | 60.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 294 | 73.13 | humidity | 70.0 | 720 | < th | dose independent | rect. | 9 | 8 |
| 301 | 73.15 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 310 | 73.16 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 332 | 73.22 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 8 |
| 350 | 73.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 362 | 73.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 363 | 73.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 19 |
| 376 | 73.28 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 392 | 73.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 399 | 73.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 433 | 73.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 434 | 73.34 | temperature | 30.0 | 270 | > th | dose independent | rect. | 15 | 23 |
| 447 | 73.36 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 494 | 73.40 | temperature | 30.0 | 270 | > th | dose independent | sin | 0 | NA |
| 520 | 73.43 | humidity | 60.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 543 | 73.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 11 |
| 545 | 73.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 547 | 73.46 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 615 | 73.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 621 | 73.50 | temperature | 30.0 | 270 | > th | dose independent | no | NA | NA |
| 622 | 73.50 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 11 |
| 714 | 73.50 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 717 | 73.51 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 825 | 73.53 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 861 | 73.55 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 18 |
| 870 | 73.55 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 10 | 4 |
| 871 | 73.55 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 8 | 8 |
| 890 | 73.56 | humidity | 70.0 | 270 | > th | dose independent | rect. | 12 | 23 |
| 907 | 73.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 922 | 73.58 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 951 | 73.60 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 952 | 73.60 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 971 | 73.61 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 15 |