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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0445100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Auxin-induced SAUR-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.49 (0.0477) R2 : 0.156
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.72 (0.249) R2dE : 0.0959 R2E : 0.116
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.407 (0.103) R2dN8 : 0.0399 R2N8 : 0.0603
σ : 0.888
deviance : 363.48
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 22.25
memory length : 1057
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
358.19 0.889 4.49 -0.297 0.105 1.47 0.956 -0.313 -0.456 8.57 22.3 1032 -- --
358.27 0.882 4.5 -0.323 0.112 1.53 0.919 -- -0.46 8.4 22.3 1052 -- --
360.5 0.884 4.5 -0.324 0.143 1.59 -- 0.137 -0.469 6.29 22.33 1071 -- --
360.48 0.884 4.5 -0.291 0.148 1.57 -- -- -0.456 6.07 22.31 1065 -- --
361.57 0.886 4.5 -0.306 -- 1.55 -- 0.0974 -0.456 -- 22.4 1032 -- --
383.91 0.919 4.55 -0.743 0.187 -- 0.869 -- -0.681 8.67 -- -- -- --
386.39 0.921 4.55 -0.714 0.184 -- -- -- -0.681 8.85 -- -- -- --
361.58 0.886 4.5 -0.295 -- 1.53 -- -- -0.455 -- 22.4 1032 -- --
362.35 0.887 4.49 -- 0.154 1.73 -- -- -0.412 5.9 22.24 1081 -- --
388.31 0.921 4.55 -0.714 -- -- -- -- -0.679 -- -- -- -- --
399.83 0.935 4.53 -- 0.183 -- -- -- -0.601 9.14 -- -- -- --
363.48 0.888 4.49 -- -- 1.72 -- -- -0.407 -- 22.25 1057 -- --
401.76 0.936 4.53 -- -- -- -- -- -0.6 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 355.68 wind 9 14400 > th dose dependent rect. 5 8
2 356.12 wind 9 14400 > th dose dependent rect. 12 1
4 356.33 wind 9 14400 > th dose independent rect. 5 8
6 356.53 wind 9 14400 > th dose dependent rect. 9 4
13 357.23 wind 9 14400 < th dose independent rect. 5 8
14 357.30 wind 9 14400 > th dose independent rect. 9 4
17 357.40 wind 9 14400 > th dose independent rect. 22 15
19 357.43 wind 9 14400 < th dose independent rect. 21 17
23 357.63 wind 9 14400 < th dose independent rect. 11 2
37 358.03 wind 9 14400 < th dose independent rect. 1 12
49 358.39 wind 9 14400 < th dose independent rect. 7 6
59 358.80 wind 9 14400 > th dose dependent rect. 21 17
67 359.03 wind 9 14400 > th dose dependent rect. 23 14
70 359.11 temperature 20 720 < th dose dependent rect. 9 21
102 359.92 humidity 50 1440 < th dose dependent rect. 16 1
103 359.94 temperature 20 720 < th dose dependent rect. 1 21
104 360.01 humidity 50 1440 < th dose independent rect. 16 1
106 360.03 wind 9 14400 > th dose independent sin 5 NA
110 360.09 wind 9 14400 < th dose independent sin 5 NA
118 360.19 temperature 20 720 < th dose dependent rect. 13 17
158 360.69 radiation 20 4320 < th dose independent rect. 3 3
159 360.69 temperature 20 720 < th dose dependent no NA NA
167 360.74 temperature 20 720 < th dose dependent rect. 3 23
169 360.78 wind 9 14400 > th dose dependent sin 5 NA
181 360.87 temperature 25 1440 < th dose dependent rect. 11 11
192 360.96 temperature 20 720 < th dose dependent rect. 16 23
208 361.05 temperature 20 720 < th dose dependent rect. 21 23
211 361.11 temperature 25 1440 < th dose dependent rect. 17 1
212 361.11 temperature 20 720 < th dose dependent rect. 18 23
218 361.14 wind 9 14400 < th dose independent rect. 21 20
223 361.17 wind 9 14400 > th dose independent rect. 21 20
265 361.41 wind 9 14400 < th dose independent rect. 15 2
268 361.43 temperature 25 1440 < th dose dependent sin 20 NA
306 361.64 temperature 20 720 < th dose dependent sin 23 NA
322 361.72 temperature 20 720 < th dose dependent sin 13 NA
353 361.90 wind 3 1440 < th dose dependent rect. 2 1
356 361.90 wind 9 14400 > th dose dependent rect. 21 20
357 361.93 wind 9 14400 < th dose independent rect. 1 16
361 361.95 wind 9 14400 < th dose independent rect. 3 14
368 361.98 temperature 20 1440 < th dose dependent rect. 4 14
389 362.08 temperature 10 30 > th dose dependent rect. 1 23
402 362.12 humidity 50 14400 > th dose independent rect. 18 12
411 362.14 temperature 20 720 < th dose independent rect. 2 20
415 362.16 wind 9 14400 > th dose independent rect. 3 14
433 362.23 temperature 20 1440 < th dose dependent sin 1 NA
445 362.28 temperature 15 720 > th dose independent rect. 11 23
490 362.48 wind 3 43200 < th dose independent rect. 1 1
505 362.53 atmosphere 1015 4320 > th dose independent rect. 12 1
517 362.56 atmosphere 1015 4320 > th dose dependent rect. 12 1
520 362.57 wind 9 14400 > th dose independent rect. 9 8
532 362.62 temperature 20 720 > th dose independent rect. 5 19
540 362.65 atmosphere 1015 4320 < th dose independent rect. 13 1
552 362.68 temperature 25 10 < th dose independent rect. 4 19
564 362.71 temperature 10 90 > th dose dependent rect. 5 23
566 362.73 wind 9 14400 < th dose independent rect. 7 10
569 362.74 temperature 20 720 > th dose independent rect. 3 21
571 362.75 wind 9 14400 < th dose independent rect. 9 8
578 362.77 wind 9 43200 > th dose dependent rect. 17 2
630 362.92 temperature 15 720 > th dose independent rect. 23 23
640 362.94 humidity 80 1440 > th dose dependent rect. 10 1
646 362.96 temperature 15 1440 > th dose independent rect. 6 5
696 363.09 radiation 20 4320 < th dose independent rect. 1 5
702 363.10 humidity 90 1440 > th dose independent rect. 10 8
720 363.13 humidity 50 43200 > th dose independent rect. 5 1
722 363.13 radiation 20 4320 < th dose independent rect. 19 11
774 363.21 temperature 15 10 > th dose dependent rect. 6 22
780 363.23 wind 3 43200 < th dose independent rect. 23 3
791 363.25 humidity 90 1440 < th dose independent rect. 10 8
825 363.32 wind 9 1440 < th dose dependent rect. 2 1
859 363.39 humidity 90 1440 < th dose independent rect. 9 10
889 363.44 wind 3 43200 > th dose independent rect. 1 1
957 363.56 temperature 15 270 > th dose dependent rect. 5 19
975 363.59 wind 5 43200 < th dose dependent rect. 1 1