Os02g0440900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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Os02g0440900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 240.72 | 0.729 | 4.58 | 3.53 | 0.388 | -1.69 | 0.277 | 1.84 | 1.26 | 13.6 | 25.8 | 1436 | -- | -- |
| 243.78 | 0.727 | 4.65 | 2.97 | 0.382 | -1.54 | 0.131 | -- | 1.06 | 13.4 | 26 | 1439 | -- | -- |
| 241.01 | 0.723 | 4.58 | 3.52 | 0.386 | -1.69 | -- | 1.77 | 1.26 | 13.4 | 25.82 | 1436 | -- | -- |
| 243.7 | 0.727 | 4.65 | 2.98 | 0.382 | -1.55 | -- | -- | 1.09 | 13.3 | 25.9 | 1432 | -- | -- |
| 245 | 0.729 | 4.59 | 3.47 | -- | -1.9 | -- | 1.77 | 1.28 | -- | 25.88 | 1272 | -- | -- |
| 319.82 | 0.838 | 4.76 | 2.43 | 0.495 | -- | 0.316 | -- | 0.572 | 13.7 | -- | -- | -- | -- |
| 320.2 | 0.838 | 4.76 | 2.44 | 0.494 | -- | -- | -- | 0.574 | 13.5 | -- | -- | -- | -- |
| 247.56 | 0.733 | 4.66 | 3.02 | -- | -1.76 | -- | -- | 1.13 | -- | 25.83 | 1256 | -- | -- |
| 453.93 | 0.992 | 4.77 | -- | 0.301 | -0.888 | -- | -- | 0.569 | 12.6 | 25.5 | 1295 | -- | -- |
| 335.17 | 0.855 | 4.77 | 2.42 | -- | -- | -- | -- | 0.563 | -- | -- | -- | -- | -- |
| 476.57 | 1.02 | 4.82 | -- | 0.452 | -- | -- | -- | 0.303 | 13.4 | -- | -- | -- | -- |
| 457.66 | 0.996 | 4.77 | -- | -- | -0.963 | -- | -- | 0.583 | -- | 25.5 | 1135 | -- | -- |
| 489.13 | 1.03 | 4.83 | -- | -- | -- | -- | -- | 0.295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.08 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 237.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 3 | 237.93 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 5 | 239.31 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 6 | 239.38 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 7 | 239.41 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 8 | 239.50 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 9 | 239.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 10 | 239.58 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 15 | 240.21 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 21 | 240.55 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 1 | 11 |
| 23 | 240.59 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 37 | 241.14 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 41 | 241.30 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 51 | 241.48 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 52 | 241.53 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 59 | 241.61 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 71 | 241.85 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 89 | 242.14 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 98 | 242.23 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 104 | 242.28 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 12 |
| 156 | 242.52 | wind | 5.0 | 43200 | > th | dose dependent | sin | 22 | NA |
| 170 | 242.62 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 177 | 242.63 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 188 | 242.72 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 205 | 242.81 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 21 |
| 219 | 242.84 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 19 |
| 234 | 242.87 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 247 | 242.91 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 271 | 242.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 273 | 242.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 279 | 242.98 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 289 | 243.00 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 316 | 243.07 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 328 | 243.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 330 | 243.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 335 | 243.10 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 365 | 243.17 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 368 | 243.18 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 417 | 243.34 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 451 | 243.47 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 453 | 243.49 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 454 | 243.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 466 | 243.54 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 19 |
| 500 | 243.65 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 526 | 243.71 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 545 | 243.74 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 639 | 243.96 | wind | 7.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 641 | 243.97 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 659 | 244.01 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 689 | 244.08 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 733 | 244.18 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 739 | 244.19 | wind | 7.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 792 | 244.29 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 798 | 244.29 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 20 |
| 805 | 244.32 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |