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Os02g0438700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.27 (0.0169) R2 : 0.835
β1 : -1.41 (0.062) R2dD : 0.196 R2D : 0.154
β2 : 1.85 (0.0431) R2dC : 0.666 R2C : 0.638
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.254 (0.0361) R2dN8 : 0.0239 R2N8 : -0.011
σ : 0.318
deviance : 46.18
__
_____
C
peak time of C : 4.05
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.43 0.291 8.25 -1.35 1.42 0.754 -0.537 0.208 -0.198 5.88 0.17 120 -- --
38.66 0.29 8.25 -1.35 1.42 0.755 -0.5 -- -0.196 5.9 0.16 121 -- --
39.08 0.291 8.25 -1.36 1.41 0.751 -- 0.164 -0.198 5.87 0.1673 122 -- --
39.22 0.292 8.24 -1.35 1.42 0.746 -- -- -0.194 5.85 0.1667 123 -- --
47.12 0.32 8.24 -1.14 -- 1.81 -- -0.00881 -0.146 -- 0.1654 516 -- --
46.18 0.319 8.27 -1.41 1.85 -- 0.046 -- -0.253 4.04 -- -- -- --
46.18 0.318 8.27 -1.41 1.85 -- -- -- -0.254 4.05 -- -- -- --
46.49 0.318 8.26 -1.25 -- 1.85 -- -- -0.174 -- 0.17 527 -- --
87.32 0.435 8.21 -- 1.33 0.701 -- -- -0.0632 5.56 0.01811 147 -- --
232.01 0.712 8.28 -1.34 -- -- -- -- -0.204 -- -- -- -- --
98.87 0.465 8.23 -- 1.82 -- -- -- -0.0961 4.06 -- -- -- --
85.94 0.432 8.25 -- -- 1.89 -- -- -0.0552 -- 0.05001 531 -- --
279.28 0.78 8.24 -- -- -- -- -- -0.0558 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.18 temperature 15.0 270 > th dose independent rect. 17 11
2 35.61 temperature 15.0 270 > th dose independent rect. 7 22
3 35.63 temperature 15.0 10 > th dose independent rect. 11 19
7 36.47 precipitation 0.1 1440 < th dose independent rect. 12 1
8 36.47 precipitation 0.1 1440 < th dose dependent rect. 12 1
14 36.81 temperature 15.0 720 > th dose independent rect. 17 4
17 36.89 wind 9.0 270 < th dose independent rect. 7 22
18 36.91 wind 7.0 270 < th dose independent rect. 17 11
20 36.97 humidity 50.0 270 > th dose dependent rect. 5 2
22 37.03 wind 7.0 720 < th dose independent rect. 24 5
25 37.05 temperature 10.0 720 > th dose dependent rect. 5 3
26 37.13 radiation 20.0 270 < th dose independent rect. 5 2
30 37.17 humidity 70.0 270 > th dose independent rect. 5 2
31 37.18 wind 7.0 270 < th dose independent rect. 5 2
33 37.18 temperature 10.0 270 > th dose independent rect. 5 2
35 37.18 temperature 30.0 270 < th dose independent rect. 5 2
36 37.18 humidity 50.0 270 > th dose independent rect. 5 2
38 37.18 atmosphere 995.0 270 > th dose independent rect. 5 2
39 37.18 atmosphere 1015.0 270 < th dose independent rect. 5 2
42 37.18 precipitation 0.1 270 < th dose independent rect. 5 2
44 37.18 precipitation 0.1 270 < th dose dependent rect. 5 2
46 37.21 wind 9.0 720 < th dose independent rect. 17 19
47 37.22 temperature 15.0 1440 > th dose independent rect. 12 1
50 37.24 temperature 10.0 270 > th dose dependent rect. 18 10
51 37.27 radiation 40.0 270 < th dose dependent rect. 5 2
55 37.31 wind 9.0 90 < th dose independent rect. 10 19
58 37.39 precipitation 0.1 90 < th dose independent rect. 5 5
59 37.39 precipitation 0.1 90 < th dose dependent rect. 5 5
60 37.40 wind 9.0 90 < th dose independent rect. 5 5
61 37.40 temperature 10.0 90 > th dose independent rect. 5 5
63 37.40 temperature 20.0 10 > th dose independent rect. 6 5
64 37.40 humidity 50.0 90 > th dose independent rect. 5 5
65 37.40 atmosphere 995.0 90 > th dose independent rect. 5 5
66 37.40 atmosphere 1015.0 90 < th dose independent rect. 5 5
71 37.46 wind 9.0 270 < th dose dependent rect. 5 2
77 37.56 wind 9.0 10 < th dose independent rect. 11 19
81 37.59 wind 9.0 720 < th dose dependent rect. 24 5
84 37.60 radiation 1.0 720 < th dose dependent rect. 24 5
85 37.61 temperature 10.0 720 > th dose independent rect. 24 5
86 37.61 temperature 30.0 720 < th dose independent rect. 24 5
87 37.61 humidity 50.0 720 > th dose independent rect. 24 5
90 37.61 atmosphere 995.0 720 > th dose independent rect. 24 5
91 37.61 radiation 20.0 720 < th dose independent rect. 24 5
95 37.61 temperature 10.0 720 > th dose independent rect. 5 19
96 37.62 temperature 30.0 90 < th dose independent rect. 5 5
100 37.63 radiation 30.0 720 < th dose dependent rect. 24 5
102 37.64 wind 9.0 10 < th dose independent rect. 6 5
106 37.65 temperature 10.0 10 > th dose independent rect. 6 5
108 37.65 humidity 50.0 10 > th dose independent rect. 6 5
109 37.65 atmosphere 995.0 10 > th dose independent rect. 6 5
110 37.65 atmosphere 1015.0 10 < th dose independent rect. 6 5
111 37.65 precipitation 0.1 10 < th dose independent rect. 6 5
115 37.65 precipitation 0.1 10 < th dose dependent rect. 6 5
118 37.68 radiation 1.0 90 > th dose independent rect. 18 16
127 37.76 temperature 10.0 720 > th dose independent rect. 12 5
128 37.76 atmosphere 1015.0 720 < th dose independent rect. 12 5
129 37.76 temperature 10.0 720 > th dose independent rect. 17 19
130 37.76 temperature 10.0 10 > th dose dependent rect. 20 10
131 37.77 radiation 1.0 90 > th dose independent rect. 5 5
134 37.77 wind 9.0 270 < th dose dependent rect. 17 11
135 37.78 wind 1.0 10 > th dose independent rect. 6 5
157 37.82 radiation 1.0 10 > th dose independent rect. 6 5
159 37.87 precipitation 0.1 720 < th dose independent rect. 24 5
160 37.87 radiation 1.0 90 > th dose independent rect. 12 23
161 37.87 precipitation 0.1 720 < th dose dependent rect. 24 5
163 37.88 temperature 10.0 90 > th dose dependent rect. 5 5
164 37.89 temperature 30.0 10 < th dose independent rect. 6 5
165 37.89 wind 9.0 720 < th dose independent rect. 24 14
168 37.91 temperature 10.0 1440 > th dose independent rect. 7 5
171 37.91 atmosphere 995.0 1440 > th dose independent rect. 7 5
172 37.91 temperature 10.0 1440 > th dose independent rect. 12 19
176 37.91 wind 9.0 10 < th dose dependent rect. 6 5
180 37.95 precipitation 0.1 720 < th dose independent rect. 12 5
182 37.95 precipitation 0.1 720 < th dose dependent rect. 12 5
183 37.96 precipitation 0.1 270 < th dose independent rect. 4 13
184 37.96 precipitation 0.1 270 < th dose dependent rect. 4 13
190 37.99 wind 9.0 90 < th dose dependent rect. 5 5
192 37.99 wind 9.0 10 < th dose dependent rect. 11 19
210 38.01 humidity 50.0 270 > th dose independent rect. 17 11
215 38.03 temperature 15.0 270 > th dose independent rect. 4 13
216 38.03 temperature 30.0 90 < th dose dependent rect. 10 5
217 38.04 atmosphere 1015.0 90 < th dose independent rect. 10 19
222 38.08 temperature 30.0 270 < th dose dependent rect. 11 1
228 38.11 radiation 30.0 270 < th dose dependent rect. 17 11
243 38.13 temperature 30.0 10 < th dose independent rect. 11 19
247 38.16 atmosphere 995.0 90 > th dose independent rect. 10 19
257 38.20 radiation 10.0 270 < th dose independent rect. 17 11
262 38.20 atmosphere 1015.0 270 < th dose independent rect. 4 13
276 38.24 temperature 10.0 10 > th dose dependent rect. 6 14
285 38.28 atmosphere 1015.0 10 < th dose independent rect. 11 19
296 38.33 atmosphere 995.0 10 > th dose independent rect. 11 19
297 38.33 temperature 10.0 10 > th dose dependent rect. 6 5
298 38.33 wind 9.0 90 < th dose dependent rect. 19 10
312 38.36 precipitation 0.1 270 < th dose independent rect. 12 12
314 38.36 precipitation 0.1 270 < th dose dependent rect. 12 12
324 38.37 precipitation 0.1 10 < th dose independent rect. 11 19
328 38.37 temperature 30.0 270 < th dose dependent rect. 8 6
329 38.37 precipitation 0.1 10 < th dose dependent rect. 11 19
330 38.38 temperature 10.0 270 > th dose independent rect. 12 12
331 38.38 temperature 10.0 270 > th dose independent rect. 24 12
332 38.38 atmosphere 995.0 270 > th dose independent rect. 24 12
336 38.39 atmosphere 1015.0 270 < th dose independent rect. 24 12
338 38.39 atmosphere 995.0 90 > th dose dependent rect. 5 5
351 38.44 precipitation 0.1 90 < th dose independent rect. 10 19
354 38.44 precipitation 0.1 90 < th dose dependent rect. 10 19
358 38.45 humidity 50.0 90 > th dose dependent rect. 5 5
359 38.46 radiation 40.0 90 < th dose independent rect. 5 5
360 38.46 temperature 10.0 720 > th dose independent rect. 14 10
361 38.46 temperature 10.0 720 > th dose independent rect. 24 14
362 38.46 atmosphere 995.0 720 > th dose independent rect. 24 14
365 38.46 humidity 50.0 90 > th dose dependent rect. 17 12
370 38.49 temperature 10.0 90 > th dose dependent rect. 5 14
390 38.51 atmosphere 995.0 14400 > th dose independent rect. 7 5
391 38.51 temperature 15.0 1440 > th dose independent rect. 12 11
403 38.52 atmosphere 995.0 270 > th dose dependent rect. 5 2
407 38.53 wind 9.0 720 < th dose independent rect. 2 10
409 38.53 temperature 30.0 270 < th dose dependent rect. 5 2
422 38.56 humidity 50.0 10 > th dose dependent rect. 6 5
431 38.59 temperature 10.0 720 > th dose independent rect. 2 10
432 38.59 atmosphere 995.0 720 > th dose independent rect. 2 10
433 38.59 wind 9.0 270 < th dose independent rect. 24 12
434 38.59 temperature 10.0 720 > th dose independent rect. 12 14
437 38.60 radiation 20.0 720 < th dose independent rect. 22 9
438 38.60 wind 1.0 270 > th dose independent rect. 12 12
440 38.60 atmosphere 995.0 10 > th dose dependent rect. 6 5
441 38.61 wind 9.0 270 < th dose independent rect. 4 13
451 38.62 temperature 15.0 10 > th dose independent rect. 20 10
453 38.62 precipitation 0.1 270 < th dose independent rect. 24 12
457 38.62 precipitation 0.1 270 < th dose dependent rect. 24 12
458 38.63 wind 1.0 270 > th dose independent rect. 5 2
462 38.64 temperature 15.0 720 > th dose independent rect. 10 10
464 38.64 humidity 50.0 90 > th dose independent rect. 10 19
466 38.64 wind 9.0 720 < th dose independent rect. 24 21
467 38.64 radiation 1.0 90 < th dose dependent sin 10 NA
469 38.65 atmosphere 995.0 270 > th dose independent rect. 4 13
470 38.66 temperature 30.0 10 < th dose independent rect. 11 3
476 38.70 radiation 1.0 270 > th dose independent rect. 4 3
496 38.71 temperature 25.0 270 < th dose independent rect. 9 4
521 38.78 atmosphere 995.0 720 > th dose independent rect. 12 5
538 38.82 radiation 1.0 90 < th dose independent sin 10 NA
546 38.82 precipitation 0.1 270 < th dose independent rect. 7 22
550 38.82 precipitation 0.1 270 < th dose dependent rect. 7 22
590 38.86 radiation 1.0 90 < th dose dependent rect. 19 11
593 38.87 atmosphere 1010.0 90 < th dose independent rect. 19 10
600 38.88 radiation 1.0 90 < th dose independent rect. 19 11
602 38.90 temperature 25.0 270 < th dose independent rect. 10 1
652 38.99 atmosphere 995.0 270 > th dose independent rect. 17 11
676 39.05 wind 9.0 720 < th dose independent rect. 10 10
680 39.05 radiation 1.0 90 > th dose independent rect. 15 19
681 39.05 precipitation 0.1 720 < th dose independent rect. 17 19
686 39.05 precipitation 0.1 720 < th dose dependent rect. 17 19
688 39.06 wind 9.0 720 < th dose independent rect. 8 14
714 39.09 precipitation 0.1 720 < th dose independent rect. 2 10
717 39.09 precipitation 0.1 720 < th dose dependent rect. 2 10
720 39.10 temperature 15.0 720 > th dose independent rect. 8 13
730 39.11 humidity 50.0 90 > th dose dependent rect. 10 19
740 39.13 precipitation 0.1 720 < th dose independent rect. 5 19
744 39.13 precipitation 0.1 720 < th dose dependent rect. 5 19
788 39.20 temperature 30.0 10 < th dose independent rect. 11 1
789 39.20 precipitation 0.1 270 < th dose independent rect. 17 11
793 39.20 precipitation 0.1 270 < th dose dependent rect. 17 11
807 39.22 atmosphere 1015.0 270 < th dose dependent rect. 5 2
812 39.23 radiation 40.0 10 < th dose independent rect. 6 5
814 39.23 atmosphere 1010.0 10 < th dose independent rect. 20 10
815 39.23 wind 1.0 30 > th dose independent rect. 12 23
817 39.24 temperature 30.0 720 < th dose dependent rect. 23 1
831 39.27 precipitation 0.1 30 < th dose independent rect. 12 23
835 39.27 precipitation 0.1 30 < th dose dependent rect. 12 23
845 39.29 atmosphere 995.0 30 > th dose dependent rect. 11 1
846 39.29 radiation 1.0 90 < th dose dependent rect. 19 17
848 39.29 humidity 50.0 10 > th dose dependent rect. 11 19
859 39.30 humidity 50.0 270 > th dose independent rect. 7 22
862 39.31 radiation 1.0 90 > th dose independent sin 10 NA
865 39.31 humidity 50.0 720 > th dose independent rect. 17 19
874 39.33 wind 9.0 270 < th dose independent rect. 12 12
900 39.36 wind 9.0 720 < th dose independent rect. 17 4
925 39.39 atmosphere 995.0 270 > th dose independent rect. 12 12
931 39.40 humidity 90.0 10 < th dose independent rect. 6 5
935 39.40 radiation 1.0 90 < th dose dependent rect. 19 22
953 39.41 humidity 50.0 720 > th dose independent rect. 19 15