Os02g0433900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0433900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.91 | 0.497 | 6.51 | -1.88 | 0.405 | -0.572 | 0.425 | -1.87 | -0.289 | 1.52 | 21.4 | 890 | -- | -- |
| 120.66 | 0.512 | 6.45 | -1.41 | 0.37 | -0.474 | -0.0415 | -- | -0.18 | 1.3 | 21.3 | 657 | -- | -- |
| 112.57 | 0.494 | 6.51 | -1.86 | 0.405 | -0.565 | -- | -1.73 | -0.284 | 1.32 | 21.5 | 877 | -- | -- |
| 120.61 | 0.511 | 6.45 | -1.42 | 0.367 | -0.47 | -- | -- | -0.184 | 1.19 | 21.31 | 625 | -- | -- |
| 120.71 | 0.512 | 6.5 | -1.76 | -- | -0.568 | -- | -1.62 | -0.281 | -- | 20.77 | 510 | -- | -- |
| 128.65 | 0.532 | 6.48 | -1.58 | 0.346 | -- | 0.202 | -- | -0.314 | 2.38 | -- | -- | -- | -- |
| 128.76 | 0.531 | 6.48 | -1.58 | 0.345 | -- | -- | -- | -0.314 | 2.09 | -- | -- | -- | -- |
| 122.1 | 0.515 | 6.47 | -1.48 | -- | -0.47 | -- | -- | -0.274 | -- | 28.64 | 108 | -- | -- |
| 165.08 | 0.598 | 6.48 | -- | 0.397 | -0.7 | -- | -- | 0.0499 | 1.89 | 21.6 | 6204 | -- | -- |
| 135.91 | 0.545 | 6.48 | -1.57 | -- | -- | -- | -- | -0.306 | -- | -- | -- | -- | -- |
| 194.67 | 0.653 | 6.44 | -- | 0.316 | -- | -- | -- | -0.138 | 1.98 | -- | -- | -- | -- |
| 141.08 | 0.553 | 6.35 | -- | -- | -1.15 | -- | -- | 0.244 | -- | 21.09 | 47520 | -- | -- |
| 200.68 | 0.661 | 6.44 | -- | -- | -- | -- | -- | -0.132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.37 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 8 | 113.30 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 9 | 113.31 | temperature | 10.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 13 | 113.54 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 20 |
| 18 | 113.64 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 26 | 113.95 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 33 | 114.07 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 3 | 13 |
| 38 | 114.15 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 43 | 114.19 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 55 | 114.29 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 68 | 114.38 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 73 | 114.39 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 74 | 114.42 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 78 | 114.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 2 | 13 |
| 80 | 114.45 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 19 |
| 89 | 114.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 98 | 114.52 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 99 | 114.52 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 21 |
| 102 | 114.53 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 105 | 114.53 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 107 | 114.53 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 21 |
| 118 | 114.55 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 12 |
| 146 | 114.57 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 152 | 114.57 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 154 | 114.59 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 163 | 114.60 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 170 | 114.61 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 185 | 114.64 | temperature | 20.0 | 720 | > th | dose independent | sin | 22 | NA |
| 215 | 114.69 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 234 | 114.71 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 255 | 114.76 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 266 | 114.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 21 |
| 285 | 114.79 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 300 | 114.80 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 21 |
| 310 | 114.81 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 17 |
| 315 | 114.82 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 316 | 114.82 | temperature | 20.0 | 720 | < th | dose independent | rect. | 12 | 18 |
| 362 | 114.87 | atmosphere | 995.0 | 14400 | < th | dose dependent | no | NA | NA |
| 440 | 114.92 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 460 | 114.94 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 501 | 114.99 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 17 |
| 502 | 114.99 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 523 | 115.02 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 524 | 115.03 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 539 | 115.04 | atmosphere | 995.0 | 14400 | > th | dose independent | no | NA | NA |
| 540 | 115.04 | atmosphere | 995.0 | 14400 | < th | dose independent | no | NA | NA |
| 541 | 115.04 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 543 | 115.04 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 600 | 115.05 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 603 | 115.05 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 618 | 115.07 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 643 | 115.09 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 648 | 115.09 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 651 | 115.09 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 653 | 115.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 660 | 115.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 663 | 115.10 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 672 | 115.11 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 712 | 115.13 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 23 |
| 796 | 115.18 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 810 | 115.19 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 820 | 115.19 | temperature | 25.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 853 | 115.22 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 23 |
| 888 | 115.25 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 906 | 115.27 | temperature | 20.0 | 720 | < th | dose independent | sin | 14 | NA |
| 974 | 115.32 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 5 |