Os02g0332700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0332700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.95 | 0.596 | 8.78 | 0.0362 | 0.811 | -1.5 | 0.05 | 3.14 | 0.701 | 0.846 | -0.1006 | 10 | -- | -- |
| 171.29 | 0.614 | 8.78 | 0.101 | 0.8 | -1.6 | -1.8 | -- | 0.704 | 0.967 | -0.1006 | 10 | -- | -- |
| 160.22 | 0.594 | 8.78 | 0.08 | 0.883 | -1.47 | -- | 3.39 | 0.706 | 0.822 | -0.1006 | 10 | -- | -- |
| 181.73 | 0.628 | 8.76 | 0.115 | 0.661 | -1.74 | -- | -- | 0.76 | 0.659 | -14.98 | 48 | -- | -- |
| 175.69 | 0.617 | 8.73 | 0.0686 | -- | -2.3 | -- | 3.3 | 0.792 | -- | -8.441 | 47 | -- | -- |
| 205.73 | 0.672 | 8.8 | 0.0675 | 1.63 | -- | -1.64 | -- | 0.706 | 0.553 | -- | -- | -- | -- |
| 217.21 | 0.69 | 8.79 | 0.13 | 1.64 | -- | -- | -- | 0.715 | 0.495 | -- | -- | -- | -- |
| 191.6 | 0.645 | 8.75 | 0.136 | -- | -2.48 | -- | -- | 0.79 | -- | -10.29 | 48 | -- | -- |
| 182.13 | 0.629 | 8.77 | -- | 0.656 | -1.75 | -- | -- | 0.75 | 0.666 | -14.77 | 48 | -- | -- |
| 385.62 | 0.918 | 8.76 | 0.187 | -- | -- | -- | -- | 0.742 | -- | -- | -- | -- | -- |
| 217.65 | 0.69 | 8.8 | -- | 1.64 | -- | -- | -- | 0.7 | 0.499 | -- | -- | -- | -- |
| 192.08 | 0.645 | 8.75 | -- | -- | -2.48 | -- | -- | 0.775 | -- | -11.52 | 48 | -- | -- |
| 386.55 | 0.918 | 8.77 | -- | -- | -- | -- | -- | 0.721 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.70 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 2 | 158.90 | radiation | 40 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 3 | 159.03 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 4 | 159.45 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 15 | 159.47 | radiation | 40 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 17 | 159.49 | radiation | 1 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 18 | 159.51 | radiation | 40 | 10 | < th | dose dependent | sin | 1 | NA |
| 23 | 160.12 | radiation | 1 | 10 | > th | dose dependent | sin | 0 | NA |
| 24 | 160.17 | radiation | 1 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 52 | 160.50 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 61 | 161.24 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 62 | 161.26 | radiation | 40 | 10 | < th | dose independent | rect. | 3 | 17 |
| 66 | 161.45 | radiation | 1 | 10 | > th | dose dependent | rect. | 18 | 23 |
| 68 | 161.47 | radiation | 1 | 10 | > th | dose dependent | no | NA | NA |
| 69 | 161.47 | radiation | 1 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 125 | 161.50 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 7 |
| 126 | 161.50 | radiation | 1 | 10 | > th | dose dependent | rect. | 5 | 12 |
| 177 | 161.90 | radiation | 40 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 206 | 162.18 | radiation | 40 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 207 | 162.19 | radiation | 20 | 10 | < th | dose independent | rect. | 6 | 14 |
| 225 | 162.95 | radiation | 10 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 232 | 163.22 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 19 |
| 236 | 163.33 | radiation | 40 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 251 | 163.53 | radiation | 20 | 10 | < th | dose independent | rect. | 3 | 17 |
| 253 | 163.59 | radiation | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 261 | 163.82 | radiation | 40 | 10 | < th | dose independent | rect. | 6 | 14 |
| 263 | 163.83 | radiation | 40 | 10 | < th | dose dependent | no | NA | NA |
| 390 | 163.91 | radiation | 40 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 422 | 164.10 | radiation | 1 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 423 | 164.12 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 444 | 164.34 | humidity | 50 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 493 | 164.85 | radiation | 20 | 10 | < th | dose independent | sin | 1 | NA |
| 494 | 164.86 | humidity | 90 | 10 | < th | dose dependent | sin | 1 | NA |
| 583 | 164.92 | radiation | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 585 | 164.92 | humidity | 90 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 602 | 164.98 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 17 |
| 603 | 164.98 | radiation | 40 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 639 | 165.18 | humidity | 90 | 90 | < th | dose dependent | rect. | 20 | 19 |
| 675 | 165.33 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 681 | 165.35 | radiation | 40 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 686 | 165.43 | radiation | 10 | 10 | > th | dose independent | rect. | 9 | 23 |
| 692 | 165.54 | radiation | 20 | 10 | > th | dose independent | sin | 1 | NA |
| 729 | 165.70 | humidity | 50 | 10 | > th | dose dependent | sin | 1 | NA |
| 757 | 166.06 | radiation | 40 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 761 | 166.11 | radiation | 1 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 902 | 166.35 | radiation | 20 | 10 | > th | dose independent | rect. | 16 | 23 |
| 942 | 166.54 | radiation | 20 | 10 | > th | dose independent | rect. | 11 | 23 |
| 946 | 166.57 | radiation | 20 | 10 | > th | dose independent | rect. | 7 | 8 |
| 979 | 166.63 | humidity | 80 | 90 | < th | dose dependent | rect. | 3 | 12 |