Os02g0332200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to T-complex protein 1 delta subunit.
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Os02g0332200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to T-complex protein 1 delta subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.43 | 0.295 | 11.5 | 0.983 | 0.918 | 0.751 | 0.574 | -0.697 | 0.287 | 16.8 | 50 | 4344 | -- | -- |
| 39.33 | 0.292 | 11.5 | 0.994 | 0.903 | 0.573 | 0.507 | -- | 0.268 | 16.8 | 49.94 | 5203 | -- | -- |
| 39.94 | 0.294 | 11.5 | 1.01 | 0.911 | 0.734 | -- | -0.489 | 0.288 | 16.8 | 49.32 | 5193 | -- | -- |
| 40.01 | 0.295 | 11.5 | 1 | 0.913 | 0.556 | -- | -- | 0.287 | 16.8 | 50 | 5161 | -- | -- |
| 83.09 | 0.425 | 11.4 | 0.963 | -- | 0.72 | -- | -0.196 | 0.257 | -- | 47 | 4987 | -- | -- |
| 42.61 | 0.306 | 11.5 | 1.18 | 0.915 | -- | 0.55 | -- | 0.263 | 16.9 | -- | -- | -- | -- |
| 43.38 | 0.308 | 11.5 | 1.18 | 0.919 | -- | -- | -- | 0.266 | 16.9 | -- | -- | -- | -- |
| 83.08 | 0.425 | 11.4 | 0.972 | -- | 0.637 | -- | -- | 0.257 | -- | 46.85 | 4987 | -- | -- |
| 63.79 | 0.372 | 11.5 | -- | 0.899 | 0.809 | -- | -- | 0.195 | 16.9 | 37.33 | 8406 | -- | -- |
| 87.91 | 0.438 | 11.4 | 1.15 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 80.1 | 0.419 | 11.5 | -- | 0.898 | -- | -- | -- | 0.134 | 17 | -- | -- | -- | -- |
| 104.34 | 0.476 | 11.5 | -- | -- | 1.25 | -- | -- | 0.188 | -- | 49.44 | 4965 | -- | -- |
| 122.59 | 0.517 | 11.5 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.14 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 3 | 38.19 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 4 | 38.22 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 6 | 38.25 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 8 | 38.31 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 9 | 38.31 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 23 | 38.41 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 25 | 38.43 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 41 | 38.49 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 95 | 38.64 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 99 | 38.66 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 100 | 38.66 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 106 | 38.67 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 114 | 38.67 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 22 | 14 |
| 115 | 38.67 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 20 | 16 |
| 116 | 38.67 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 149 | 38.74 | humidity | 50.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 151 | 38.74 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 152 | 38.75 | humidity | 50.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 153 | 38.75 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 156 | 38.75 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 12 |
| 158 | 38.76 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 159 | 38.76 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 167 | 38.77 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 4 |
| 194 | 38.80 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 217 | 38.81 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 240 | 38.82 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 262 | 38.84 | temperature | 10.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 263 | 38.84 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 294 | 38.85 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 383 | 38.88 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 385 | 38.88 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 390 | 38.88 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 391 | 38.88 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 396 | 38.89 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 403 | 38.89 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 405 | 38.89 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 420 | 38.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 425 | 38.91 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 426 | 38.91 | temperature | 25.0 | 10 | > th | dose independent | rect. | 23 | 10 |
| 432 | 38.91 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 440 | 38.92 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 479 | 38.95 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 492 | 38.96 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 493 | 38.96 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 497 | 38.96 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 499 | 38.97 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 502 | 38.97 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 519 | 38.97 | temperature | 25.0 | 10 | > th | dose independent | rect. | 13 | 20 |
| 525 | 38.97 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 558 | 38.98 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 577 | 39.00 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 578 | 39.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 579 | 39.00 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 591 | 39.00 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 632 | 39.01 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 642 | 39.01 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 645 | 39.01 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 648 | 39.02 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 660 | 39.02 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 669 | 39.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 671 | 39.03 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 673 | 39.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 678 | 39.03 | temperature | 30.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 680 | 39.03 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 683 | 39.03 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 8 |
| 689 | 39.03 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 690 | 39.04 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 718 | 39.04 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 726 | 39.04 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 730 | 39.05 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 5 |
| 777 | 39.06 | wind | 7.0 | 4320 | > th | dose independent | rect. | 23 | 3 |
| 788 | 39.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 799 | 39.07 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 901 | 39.09 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 903 | 39.09 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |