Os02g0330000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os02g0330000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.79 | 0.666 | 4.16 | 0.734 | 1.34 | -1 | -1.43 | -3.62 | -0.179 | 20.5 | 23.88 | 1442 | -- | -- |
| 207.72 | 0.671 | 4.24 | 0.108 | 1.12 | -0.916 | -1.53 | -- | -0.319 | 20.8 | 40.5 | 561 | -- | -- |
| 207.22 | 0.67 | 4.16 | 0.797 | 1.34 | -1.01 | -- | -3.8 | -0.169 | 20.5 | 23.66 | 1498 | -- | -- |
| 215.45 | 0.684 | 4.23 | 0.171 | 1.13 | -0.877 | -- | -- | -0.312 | 20.9 | 47.99 | 551 | -- | -- |
| 273.94 | 0.771 | 4.25 | 0.328 | -- | -1.71 | -- | -0.987 | -0.428 | -- | 34.7 | 618 | -- | -- |
| 217.66 | 0.692 | 4.21 | 0.327 | 1.34 | -- | -1.45 | -- | -0.181 | 20.6 | -- | -- | -- | -- |
| 224.41 | 0.702 | 4.21 | 0.373 | 1.34 | -- | -- | -- | -0.181 | 20.6 | -- | -- | -- | -- |
| 273.16 | 0.77 | 4.24 | -0.0669 | -- | -1.84 | -- | -- | -0.465 | -- | 43.24 | 616 | -- | -- |
| 216.12 | 0.685 | 4.24 | -- | 1.11 | -0.954 | -- | -- | -0.341 | 20.9 | 57.08 | 551 | -- | -- |
| 325.24 | 0.843 | 4.18 | 0.368 | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
| 228.08 | 0.706 | 4.22 | -- | 1.34 | -- | -- | -- | -0.223 | 20.6 | -- | -- | -- | -- |
| 273.27 | 0.77 | 4.23 | -- | -- | -1.81 | -- | -- | -0.454 | -- | 80.27 | 616 | -- | -- |
| 328.82 | 0.846 | 4.18 | -- | -- | -- | -- | -- | -0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.44 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 2 | 198.67 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 7 |
| 8 | 199.18 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 11 | 199.22 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 12 | 199.23 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 15 | 199.25 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 43 | 199.63 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 55 | 199.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 56 | 199.73 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 77 | 199.92 | wind | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 85 | 199.97 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 90 | 199.99 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 93 | 200.01 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 110 | 200.07 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 191 | 200.36 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 194 | 200.37 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 4 | 7 |
| 207 | 200.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 234 | 200.51 | radiation | 30.0 | 10 | < th | dose independent | rect. | 4 | 7 |
| 237 | 200.52 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 245 | 200.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 10 |
| 255 | 200.57 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 7 |
| 268 | 200.61 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 275 | 200.63 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 11 | 17 |
| 289 | 200.65 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 327 | 200.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 336 | 200.80 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 340 | 200.81 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 348 | 200.83 | wind | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 441 | 201.05 | wind | 1.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 492 | 201.16 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 7 |
| 525 | 201.24 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 549 | 201.28 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 601 | 201.39 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 604 | 201.40 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 612 | 201.42 | wind | 1.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 613 | 201.42 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 619 | 201.43 | temperature | 20.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 630 | 201.45 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 643 | 201.48 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 18 |
| 655 | 201.51 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 19 |
| 660 | 201.52 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 661 | 201.52 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 665 | 201.52 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 671 | 201.52 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 673 | 201.52 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 676 | 201.52 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 683 | 201.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 693 | 201.56 | wind | 1.0 | 14400 | > th | dose independent | rect. | 15 | 22 |
| 701 | 201.57 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 19 |
| 716 | 201.59 | wind | 1.0 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 725 | 201.61 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 726 | 201.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 16 |
| 729 | 201.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 741 | 201.63 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 743 | 201.63 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 771 | 201.68 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 773 | 201.69 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 811 | 201.75 | temperature | 20.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 821 | 201.77 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 827 | 201.79 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 841 | 201.83 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 855 | 201.86 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 7 |
| 857 | 201.86 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 866 | 201.87 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 898 | 201.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 19 |
| 924 | 201.93 | wind | 1.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 935 | 201.95 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 942 | 201.95 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 964 | 202.00 | wind | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 974 | 202.01 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 8 |
| 977 | 202.01 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 8 |