Os02g0329600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0329600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.79 | 0.281 | 8.77 | 0.546 | 0.0118 | -1.38 | 0.799 | 2.73 | 0.213 | 4.28 | 20.02 | 264 | -- | -- |
| 38.16 | 0.288 | 8.83 | 0.0754 | 0.355 | -1.49 | 0.061 | -- | 0.0866 | 1.25 | 14.9 | 582 | -- | -- |
| 36.66 | 0.282 | 8.79 | 0.416 | 0.161 | -1.38 | -- | 1.89 | 0.166 | 23.7 | 19.17 | 380 | -- | -- |
| 38.15 | 0.288 | 8.83 | 0.0924 | 0.323 | -1.51 | -- | -- | 0.0796 | 0.842 | 14.9 | 555 | -- | -- |
| 37.09 | 0.284 | 8.79 | 0.407 | -- | -1.38 | -- | 1.98 | 0.176 | -- | 19.89 | 268 | -- | -- |
| 65.19 | 0.379 | 8.87 | -0.262 | 0.499 | -- | 0.395 | -- | -0.149 | 4.47 | -- | -- | -- | -- |
| 65.61 | 0.379 | 8.87 | -0.265 | 0.501 | -- | -- | -- | -0.151 | 4.45 | -- | -- | -- | -- |
| 39.45 | 0.293 | 8.83 | 0.0889 | -- | -1.59 | -- | -- | 0.0818 | -- | 15 | 283 | -- | -- |
| 38.29 | 0.288 | 8.83 | -- | 0.27 | -1.48 | -- | -- | 0.0654 | 0.827 | 14.9 | 490 | -- | -- |
| 79.06 | 0.415 | 8.88 | -0.245 | -- | -- | -- | -- | -0.138 | -- | -- | -- | -- | -- |
| 67.46 | 0.384 | 8.87 | -- | 0.496 | -- | -- | -- | -0.121 | 4.47 | -- | -- | -- | -- |
| 39.63 | 0.293 | 8.83 | -- | -- | -1.55 | -- | -- | 0.0695 | -- | 15.1 | 283 | -- | -- |
| 80.64 | 0.419 | 8.87 | -- | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.03 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 3 | 32.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 4 | 33.04 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 15 | 33.44 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 19 | 33.60 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 25 | 33.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 26 | 33.80 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 30 | 33.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 34 | 33.83 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 46 | 33.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 51 | 34.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 52 | 34.12 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 66 | 34.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 80 | 34.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 132 | 34.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 156 | 34.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 167 | 34.95 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 180 | 35.02 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 181 | 35.02 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 20 |
| 202 | 35.08 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 204 | 35.08 | wind | 3 | 43200 | > th | dose dependent | rect. | 4 | 12 |
| 208 | 35.10 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 215 | 35.14 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 227 | 35.19 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 272 | 35.39 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 281 | 35.40 | wind | 7 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 283 | 35.41 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 285 | 35.41 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 290 | 35.42 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 322 | 35.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 349 | 35.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 352 | 35.50 | wind | 3 | 43200 | > th | dose dependent | sin | 2 | NA |
| 357 | 35.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 367 | 35.54 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 382 | 35.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 429 | 35.65 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 446 | 35.68 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 460 | 35.70 | radiation | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 463 | 35.70 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 475 | 35.71 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 483 | 35.72 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 502 | 35.76 | radiation | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 522 | 35.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 17 |
| 524 | 35.79 | wind | 7 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 526 | 35.80 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 527 | 35.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 538 | 35.81 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 600 | 35.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 632 | 35.91 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 646 | 35.93 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 654 | 35.93 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 21 |
| 662 | 35.95 | wind | 7 | 43200 | > th | dose independent | sin | 5 | NA |
| 692 | 35.97 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 724 | 35.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 735 | 36.01 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 746 | 36.02 | radiation | 30 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 756 | 36.03 | wind | 7 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 779 | 36.05 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 780 | 36.05 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 787 | 36.06 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 803 | 36.07 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 835 | 36.09 | wind | 7 | 43200 | > th | dose dependent | no | NA | NA |
| 848 | 36.09 | wind | 7 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 850 | 36.10 | wind | 7 | 43200 | < th | dose independent | sin | 4 | NA |
| 857 | 36.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 867 | 36.12 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 932 | 36.15 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 947 | 36.17 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 952 | 36.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 972 | 36.18 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 981 | 36.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 13 |