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Os02g0327700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF563 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.00958) R2 : 0.0584
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.107 (0.0202) R2dN8 : 0.0754 R2N8 : 0.0584
σ : 0.18
deviance : 14.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.15 0.157 10.4 -0.207 0.0993 0.257 0.26 -0.162 0.0349 17.5 20.5 393 -- --
11.25 0.156 10.4 -0.2 0.102 0.272 0.216 -- 0.0339 17.4 20.6 397 -- --
11.3 0.157 10.4 -0.196 0.0992 0.265 -- -0.0955 0.0388 17.5 20.59 400 -- --
11.33 0.157 10.4 -0.18 0.0985 0.274 -- -- 0.0426 17.5 20.5 400 -- --
11.8 0.16 10.4 -0.201 -- 0.289 -- -0.0665 0.0328 -- 20.5 392 -- --
13.65 0.173 10.4 -0.0882 0.132 -- 0.232 -- 0.0991 17.6 -- -- -- --
13.78 0.174 10.4 -0.0892 0.134 -- -- -- 0.1 17.6 -- -- -- --
11.81 0.16 10.4 -0.191 -- 0.296 -- -- 0.0347 -- 20.6 391 -- --
12.11 0.162 10.4 -- 0.112 0.23 -- -- 0.0659 17.2 20.6 395 -- --
14.71 0.179 10.4 -0.0935 -- -- -- -- 0.0969 -- -- -- -- --
13.99 0.175 10.4 -- 0.135 -- -- -- 0.11 17.6 -- -- -- --
12.66 0.166 10.4 -- -- 0.249 -- -- 0.0647 -- 20.56 345 -- --
14.94 0.18 10.4 -- -- -- -- -- 0.107 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.04 temperature 20.0 270 > th dose independent rect. 19 12
7 11.20 temperature 20.0 270 > th dose independent rect. 10 23
11 11.26 temperature 20.0 720 > th dose independent rect. 21 3
15 11.29 temperature 20.0 270 > th dose independent sin 10 NA
16 11.32 temperature 20.0 720 > th dose independent rect. 12 14
20 11.33 temperature 20.0 4320 > th dose independent rect. 13 10
26 11.35 temperature 20.0 720 > th dose independent rect. 10 14
28 11.36 temperature 20.0 720 > th dose independent rect. 19 5
30 11.36 temperature 20.0 4320 < th dose independent rect. 14 9
34 11.37 temperature 20.0 720 > th dose independent rect. 19 7
35 11.38 wind 7.0 14400 > th dose independent rect. 6 1
40 11.38 temperature 20.0 720 > th dose independent rect. 12 17
48 11.39 temperature 20.0 720 < th dose independent rect. 11 17
52 11.40 temperature 20.0 720 > th dose independent sin 15 NA
55 11.40 temperature 20.0 720 < th dose independent rect. 14 14
80 11.43 temperature 20.0 270 < th dose independent sin 9 NA
81 11.43 temperature 20.0 720 < th dose independent sin 15 NA
96 11.44 temperature 20.0 270 < th dose independent rect. 9 22
106 11.45 radiation 10.0 4320 > th dose dependent rect. 6 1
119 11.46 temperature 20.0 270 > th dose independent rect. 17 23
178 11.50 temperature 25.0 720 < th dose dependent rect. 15 13
196 11.51 temperature 20.0 270 < th dose independent rect. 21 23
197 11.51 wind 7.0 14400 > th dose dependent rect. 6 1
200 11.51 temperature 25.0 720 < th dose dependent rect. 11 17
206 11.52 temperature 20.0 720 < th dose independent rect. 19 7
225 11.53 temperature 20.0 270 > th dose independent no NA NA
226 11.53 radiation 10.0 4320 > th dose independent rect. 5 2
255 11.54 wind 7.0 14400 < th dose independent rect. 6 1
256 11.54 atmosphere 1005.0 14400 < th dose independent rect. 23 1
265 11.54 temperature 25.0 720 < th dose dependent sin 14 NA
273 11.54 temperature 15.0 270 > th dose dependent rect. 10 23
282 11.55 temperature 20.0 270 < th dose independent rect. 15 20
293 11.56 temperature 20.0 4320 > th dose independent sin 18 NA
322 11.57 temperature 20.0 4320 < th dose independent sin 18 NA
323 11.57 temperature 20.0 270 < th dose independent no NA NA
333 11.57 temperature 20.0 270 < th dose independent rect. 22 10
348 11.57 temperature 20.0 270 > th dose independent rect. 3 23
354 11.58 temperature 20.0 720 < th dose independent rect. 21 5
420 11.60 temperature 25.0 270 < th dose dependent rect. 13 21
422 11.60 temperature 10.0 270 > th dose dependent rect. 17 23
444 11.61 temperature 25.0 4320 < th dose dependent rect. 17 1
453 11.61 temperature 25.0 270 < th dose dependent rect. 21 23
478 11.62 temperature 15.0 90 > th dose dependent rect. 21 12
496 11.63 temperature 20.0 270 > th dose independent rect. 1 23
499 11.63 wind 9.0 43200 > th dose dependent rect. 18 13
507 11.64 temperature 20.0 90 > th dose independent rect. 23 10
514 11.64 temperature 20.0 10 > th dose independent rect. 21 23
521 11.64 temperature 30.0 30 < th dose dependent rect. 9 23
541 11.65 temperature 20.0 10 > th dose independent rect. 12 21
550 11.65 temperature 10.0 270 > th dose dependent rect. 3 23
553 11.66 temperature 20.0 10 > th dose independent sin 8 NA
577 11.66 temperature 30.0 90 < th dose dependent rect. 17 18
615 11.67 temperature 20.0 270 > th dose independent rect. 23 23
616 11.67 wind 1.0 43200 > th dose dependent rect. 1 1
647 11.68 temperature 20.0 270 < th dose independent rect. 3 23
649 11.68 temperature 25.0 270 < th dose dependent no NA NA
650 11.68 temperature 25.0 4320 < th dose dependent rect. 15 7
699 11.69 temperature 15.0 270 > th dose dependent rect. 19 13
712 11.70 atmosphere 1005.0 14400 > th dose independent rect. 23 1
732 11.70 temperature 25.0 4320 < th dose dependent rect. 21 1
733 11.70 humidity 80.0 14400 > th dose dependent rect. 13 1
744 11.70 temperature 30.0 10 < th dose dependent rect. 16 20
770 11.71 temperature 20.0 720 > th dose independent rect. 4 20
818 11.72 precipitation 0.1 14400 > th dose dependent rect. 21 1
820 11.72 precipitation 0.1 14400 > th dose dependent rect. 20 3
834 11.72 temperature 10.0 720 > th dose dependent rect. 12 19
852 11.73 wind 9.0 43200 > th dose independent rect. 18 13
857 11.73 wind 9.0 14400 < th dose independent rect. 21 16
868 11.73 wind 9.0 14400 > th dose dependent rect. 19 2
884 11.73 temperature 10.0 270 > th dose dependent rect. 1 23
898 11.74 temperature 20.0 720 > th dose independent rect. 6 18
907 11.74 temperature 10.0 270 > th dose dependent sin 10 NA
909 11.74 temperature 25.0 4320 < th dose dependent sin 17 NA
937 11.75 wind 9.0 14400 > th dose independent rect. 22 14
955 11.75 temperature 10.0 270 > th dose dependent no NA NA
957 11.75 humidity 50.0 43200 < th dose dependent rect. 8 1
960 11.75 wind 9.0 43200 > th dose dependent rect. 18 6
990 11.76 humidity 90.0 43200 > th dose independent rect. 13 1
994 11.76 wind 9.0 14400 > th dose independent rect. 18 3