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Os02g0326600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pattern formation protein EMB30.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0168) R2 : 0.378
β1 : 0.896 (0.0616) R2dD : 0.3 R2D : 0.169
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.384 (0.0359) R2dN8 : 0.209 R2N8 : 0.078
σ : 0.315
deviance : 45.58
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.34 0.271 10.8 0.895 0.363 0.607 -0.164 -1.36 0.436 11.9 93.79 220 -- --
34.72 0.274 10.8 0.881 0.361 0.578 -0.12 -- 0.431 11.9 93.73 232 -- --
33.41 0.269 10.8 0.889 0.361 0.62 -- -1.4 0.434 11.8 93.97 199 -- --
34.7 0.274 10.8 0.89 0.357 0.762 -- -- 0.424 11.8 94.57 194 -- --
41.52 0.3 10.8 0.878 -- 0.69 -- -1.42 0.422 -- 94.37 222 -- --
37.32 0.286 10.8 0.91 0.363 -- -0.163 -- 0.386 10.6 -- -- -- --
37.43 0.286 10.8 0.903 0.364 -- -- -- 0.386 10.6 -- -- -- --
40.67 0.297 10.8 0.895 -- 0.463 -- -- 0.438 -- 89.28 776 -- --
54.73 0.345 10.8 -- 0.336 0.61 -- -- 0.343 12.2 93 236 -- --
45.58 0.315 10.8 0.896 -- -- -- -- 0.384 -- -- -- -- --
58.92 0.359 10.8 -- 0.358 -- -- -- 0.285 10.5 -- -- -- --
58.69 0.357 10.8 -- -- 0.57 -- -- 0.374 -- 82.03 847 -- --
66.77 0.381 10.8 -- -- -- -- -- 0.284 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.18 humidity 50.0 270 > th dose dependent rect. 19 11
2 32.32 wind 7.0 720 < th dose independent rect. 15 4
7 32.62 radiation 1.0 1440 > th dose independent rect. 9 3
9 32.70 wind 7.0 720 < th dose independent rect. 17 1
35 33.09 wind 7.0 720 < th dose independent rect. 15 13
38 33.11 wind 7.0 720 < th dose independent rect. 15 20
41 33.13 humidity 60.0 10 > th dose dependent rect. 21 11
43 33.14 radiation 1.0 1440 < th dose independent rect. 11 1
44 33.14 radiation 1.0 1440 < th dose dependent rect. 11 1
51 33.24 radiation 1.0 1440 < th dose independent rect. 9 6
52 33.24 radiation 1.0 1440 < th dose dependent rect. 9 6
53 33.25 humidity 80.0 90 > th dose independent rect. 21 11
82 33.37 radiation 1.0 1440 < th dose independent rect. 13 1
83 33.37 radiation 1.0 1440 < th dose dependent rect. 13 1
86 33.38 wind 5.0 720 > th dose independent rect. 21 1
116 33.50 temperature 15.0 270 > th dose independent rect. 19 11
118 33.50 humidity 90.0 720 > th dose dependent rect. 20 1
126 33.54 radiation 1.0 1440 > th dose independent rect. 13 1
146 33.62 temperature 20.0 720 > th dose independent rect. 11 11
147 33.62 wind 1.0 90 > th dose independent rect. 17 12
152 33.63 temperature 20.0 720 > th dose independent rect. 20 2
155 33.63 wind 9.0 270 < th dose independent rect. 6 13
159 33.64 precipitation 0.1 270 < th dose independent rect. 6 13
161 33.64 wind 9.0 720 < th dose dependent rect. 15 4
162 33.64 precipitation 0.1 270 < th dose dependent rect. 6 13
164 33.65 wind 7.0 720 < th dose independent rect. 7 20
195 33.77 temperature 30.0 270 < th dose independent rect. 19 11
196 33.77 humidity 50.0 270 > th dose independent rect. 19 11
198 33.77 atmosphere 995.0 270 > th dose independent rect. 19 11
199 33.77 radiation 20.0 270 < th dose independent rect. 19 11
202 33.77 temperature 10.0 270 > th dose independent rect. 6 13
204 33.77 atmosphere 1015.0 270 < th dose independent rect. 6 13
206 33.78 humidity 50.0 720 > th dose dependent rect. 19 4
210 33.79 wind 9.0 720 < th dose independent rect. 8 10
217 33.82 wind 5.0 1440 < th dose independent rect. 21 1
232 33.86 wind 9.0 270 < th dose independent rect. 19 11
234 33.86 radiation 40.0 270 < th dose dependent rect. 19 11
236 33.87 wind 9.0 720 < th dose independent rect. 23 20
239 33.88 wind 9.0 720 < th dose dependent rect. 17 1
242 33.89 temperature 20.0 270 > th dose independent rect. 10 20
247 33.91 humidity 90.0 720 > th dose dependent rect. 20 3
276 33.97 temperature 20.0 90 > th dose independent rect. 12 19
284 33.99 wind 7.0 1440 > th dose independent rect. 14 2
293 34.00 wind 5.0 30 < th dose independent rect. 17 12
302 34.02 temperature 20.0 270 > th dose independent rect. 19 21
323 34.06 temperature 20.0 720 > th dose independent rect. 11 4
325 34.06 wind 1.0 270 > th dose independent rect. 15 11
333 34.07 temperature 20.0 10 > th dose independent rect. 22 10
339 34.08 precipitation 0.1 720 < th dose independent rect. 23 20
343 34.08 precipitation 0.1 720 < th dose dependent rect. 23 20
348 34.09 humidity 90.0 270 > th dose dependent sin 13 NA
351 34.10 humidity 90.0 270 < th dose independent rect. 11 4
365 34.12 precipitation 0.1 720 < th dose independent rect. 15 20
368 34.12 precipitation 0.1 720 < th dose dependent rect. 15 20
396 34.18 atmosphere 995.0 720 > th dose independent rect. 19 20
404 34.19 atmosphere 995.0 720 > th dose independent rect. 18 14
419 34.20 humidity 60.0 720 > th dose dependent rect. 20 1
426 34.21 humidity 80.0 90 < th dose independent rect. 18 17
430 34.21 wind 3.0 720 > th dose dependent rect. 21 1
436 34.22 precipitation 0.1 270 < th dose independent rect. 20 10
437 34.22 precipitation 0.1 720 < th dose independent rect. 23 12
440 34.22 precipitation 0.1 270 < th dose dependent rect. 20 10
441 34.22 precipitation 0.1 720 < th dose dependent rect. 23 12
444 34.23 temperature 15.0 720 > th dose independent rect. 7 20
459 34.25 temperature 20.0 10 > th dose independent rect. 22 20
465 34.25 atmosphere 1015.0 90 < th dose dependent rect. 21 10
469 34.26 wind 7.0 4320 > th dose independent rect. 17 1
480 34.27 wind 7.0 4320 < th dose independent rect. 17 1
495 34.29 temperature 15.0 720 > th dose independent rect. 3 4
508 34.29 atmosphere 1010.0 90 < th dose dependent rect. 23 8
511 34.29 atmosphere 1015.0 10 < th dose dependent rect. 22 10
517 34.30 precipitation 0.1 720 < th dose independent rect. 15 4
518 34.30 atmosphere 1005.0 270 < th dose independent rect. 22 7
519 34.30 wind 1.0 720 > th dose independent rect. 16 9
522 34.30 precipitation 0.1 720 < th dose dependent rect. 15 4
539 34.32 precipitation 0.1 270 > th dose independent rect. 2 2
545 34.32 wind 1.0 90 < th dose dependent rect. 24 1
546 34.32 precipitation 0.1 270 > th dose dependent rect. 2 2
562 34.33 temperature 15.0 270 > th dose independent rect. 2 13
563 34.33 wind 1.0 90 > th dose independent rect. 7 14
565 34.33 radiation 10.0 4320 < th dose dependent rect. 19 10
572 34.34 humidity 90.0 270 < th dose independent rect. 23 11
596 34.36 wind 5.0 720 > th dose independent rect. 18 5
613 34.37 wind 1.0 10 > th dose independent rect. 8 14
620 34.38 wind 1.0 90 < th dose independent rect. 24 1
621 34.38 wind 7.0 720 < th dose independent rect. 22 6
633 34.39 humidity 80.0 90 < th dose independent sin 9 NA
635 34.39 radiation 40.0 270 < th dose independent rect. 15 11
640 34.39 humidity 50.0 720 > th dose dependent rect. 3 4
657 34.41 wind 1.0 1440 < th dose independent rect. 6 1
660 34.41 atmosphere 1015.0 720 < th dose independent rect. 3 4
663 34.41 wind 1.0 90 > th dose independent rect. 17 19
673 34.42 precipitation 0.1 270 < th dose independent rect. 15 11
675 34.42 humidity 50.0 90 > th dose dependent sin 10 NA
676 34.42 precipitation 0.1 270 < th dose dependent rect. 15 11
679 34.43 atmosphere 995.0 720 > th dose independent rect. 11 4
691 34.43 wind 1.0 270 > th dose independent rect. 15 20
692 34.43 temperature 15.0 720 > th dose independent rect. 3 20
694 34.43 atmosphere 995.0 720 > th dose independent rect. 11 20
700 34.44 humidity 90.0 270 < th dose independent rect. 10 6
744 34.47 wind 1.0 1440 > th dose independent rect. 6 1
747 34.47 precipitation 0.1 720 < th dose independent rect. 7 4
749 34.47 precipitation 0.1 720 < th dose independent rect. 23 5
751 34.47 temperature 10.0 270 > th dose independent rect. 15 11
755 34.47 atmosphere 1015.0 270 < th dose independent rect. 2 13
759 34.47 wind 5.0 1440 > th dose dependent rect. 14 1
761 34.47 precipitation 0.1 720 < th dose dependent rect. 7 4
762 34.47 precipitation 0.1 720 < th dose dependent rect. 23 5
773 34.47 radiation 1.0 720 < th dose dependent rect. 4 13
777 34.48 precipitation 0.1 270 < th dose independent rect. 11 4
785 34.48 precipitation 0.1 270 < th dose dependent rect. 11 4
786 34.48 atmosphere 1005.0 10 < th dose dependent rect. 1 6
811 34.50 wind 9.0 720 < th dose independent rect. 7 4
813 34.50 temperature 10.0 720 > th dose independent rect. 7 4
814 34.50 humidity 50.0 720 > th dose independent rect. 7 4
815 34.50 atmosphere 995.0 720 > th dose independent rect. 7 4
816 34.50 atmosphere 1015.0 720 < th dose independent rect. 7 4
821 34.50 temperature 10.0 720 > th dose independent rect. 11 20
831 34.51 radiation 1.0 720 < th dose independent rect. 17 6
834 34.51 precipitation 0.1 720 < th dose independent rect. 24 10
838 34.51 humidity 50.0 720 > th dose independent rect. 11 20
839 34.51 humidity 50.0 270 > th dose independent rect. 9 22
841 34.51 humidity 90.0 90 < th dose dependent sin 10 NA
843 34.51 radiation 40.0 720 < th dose dependent rect. 3 4
846 34.51 precipitation 0.1 720 < th dose dependent rect. 24 10
854 34.52 atmosphere 1015.0 270 < th dose independent rect. 11 4
857 34.52 precipitation 0.1 720 < th dose independent rect. 22 14
861 34.52 radiation 1.0 270 > th dose independent rect. 16 19
862 34.52 temperature 10.0 270 > th dose independent rect. 15 20
870 34.52 precipitation 0.1 720 < th dose dependent rect. 22 14
873 34.53 humidity 80.0 720 > th dose independent rect. 5 1
890 34.54 wind 9.0 720 < th dose independent rect. 3 4
892 34.54 temperature 30.0 720 < th dose independent rect. 3 4
893 34.54 humidity 50.0 720 > th dose independent rect. 3 4
895 34.54 humidity 80.0 720 > th dose independent rect. 3 4
896 34.54 atmosphere 995.0 720 > th dose independent rect. 3 4
897 34.54 radiation 30.0 720 < th dose independent rect. 3 4
900 34.54 atmosphere 1005.0 10 < th dose independent rect. 23 8
911 34.55 wind 9.0 270 < th dose independent rect. 11 4
913 34.55 humidity 50.0 90 > th dose independent rect. 12 5
914 34.55 humidity 60.0 10 > th dose independent rect. 12 6
917 34.55 wind 9.0 270 < th dose independent rect. 2 13
918 34.55 humidity 90.0 270 < th dose independent rect. 15 19
929 34.56 humidity 60.0 14400 > th dose independent rect. 20 2
940 34.56 precipitation 0.1 720 < th dose independent rect. 7 21
944 34.56 precipitation 0.1 720 < th dose dependent rect. 7 21
945 34.57 radiation 1.0 720 > th dose independent rect. 17 1
948 34.57 wind 7.0 720 < th dose independent rect. 23 4
950 34.57 temperature 30.0 720 < th dose independent rect. 19 4
952 34.57 humidity 50.0 720 > th dose independent rect. 19 4
953 34.57 atmosphere 995.0 720 > th dose independent rect. 19 4
954 34.57 radiation 1.0 720 < th dose independent rect. 19 4
963 34.57 atmosphere 995.0 270 > th dose independent rect. 2 13
969 34.57 temperature 10.0 720 > th dose independent rect. 23 20
970 34.57 radiation 1.0 270 > th dose independent rect. 15 21
971 34.57 radiation 1.0 720 < th dose dependent rect. 19 4
977 34.57 wind 5.0 720 > th dose dependent rect. 17 6