Os02g0323600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0323600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cytochrome P450-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 257.31 | 0.754 | 10.1 | 0.0468 | 1.4 | -6.35 | 2.29 | -12.1 | 0.712 | 5.05 | 0.2226 | 1401 | 14.6 | -- |
| 283 | 0.784 | 10.3 | -0.368 | 1.67 | -3.46 | 2.07 | -- | 0.542 | 5.05 | 2.114 | 1335 | 14 | -- |
| 269.3 | 0.764 | 10.1 | -0.0292 | 1.33 | -6.45 | -- | -12.3 | 0.688 | 4.64 | 0.2177 | 1410 | 15.3 | -- |
| 291.78 | 0.796 | 10.3 | -0.338 | 1.79 | -3.61 | -- | -- | 0.539 | 5.51 | 2.028 | 1335 | 12.7 | -- |
| 352.89 | 0.875 | 10.1 | -0.0118 | -- | -6.9 | -- | -13.6 | 0.694 | -- | 0.2169 | 1442 | 16.1 | -- |
| 401.28 | 0.939 | 10.3 | 0.167 | 1.23 | -- | 2.14 | -- | 0.937 | 4.02 | -- | -- | -- | -- |
| 414.37 | 0.953 | 10.3 | 0.142 | 1.25 | -- | -- | -- | 0.925 | 4.03 | -- | -- | -- | -- |
| 384.38 | 0.913 | 10.4 | -0.125 | -- | -2.62 | -- | -- | 0.592 | -- | 2.735 | 1441 | 12.7 | -- |
| 294.23 | 0.799 | 10.3 | -- | 1.84 | -3.55 | -- | -- | 0.59 | 5.58 | 2.345 | 1327 | 12.6 | -- |
| 499.05 | 1.04 | 10.3 | 0.192 | -- | -- | -- | -- | 0.958 | -- | -- | -- | -- | -- |
| 414.9 | 0.953 | 10.3 | -- | 1.25 | -- | -- | -- | 0.909 | 4.03 | -- | -- | -- | -- |
| 369.66 | 0.895 | 10.3 | -- | -- | -2.56 | -- | -- | 0.721 | -- | 2.443 | 1424 | 7.2 | -- |
| 500.03 | 1.04 | 10.3 | -- | -- | -- | -- | -- | 0.937 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 271.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 2 | 275.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 22 | 278.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 24 | 278.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 26 | 279.01 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 29 | 279.04 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 32 | 279.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 39 | 279.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 48 | 279.27 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 49 | 279.28 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 77 | 279.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 90 | 281.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 107 | 282.12 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 133 | 284.11 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 138 | 284.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 140 | 284.50 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 143 | 284.56 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 192 | 285.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 195 | 285.57 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 199 | 285.66 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 200 | 285.67 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 212 | 285.80 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 224 | 285.88 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 226 | 285.89 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 228 | 285.90 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 231 | 285.91 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 289 | 286.30 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 300 | 286.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 314 | 286.65 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 329 | 286.78 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 332 | 286.87 | radiation | 1 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 350 | 287.71 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 363 | 287.82 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 367 | 288.04 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 413 | 288.14 | radiation | 1 | 1440 | > th | dose independent | sin | 23 | NA |
| 418 | 288.33 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 421 | 288.50 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 424 | 288.64 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 436 | 288.98 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 441 | 289.17 | radiation | 1 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 450 | 289.42 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 451 | 289.42 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 518 | 290.79 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 548 | 291.26 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 561 | 291.45 | radiation | 1 | 1440 | > th | dose independent | sin | 14 | NA |
| 562 | 291.45 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 563 | 291.46 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 567 | 291.49 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 571 | 291.50 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 579 | 291.59 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 580 | 291.59 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 613 | 292.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 629 | 292.53 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 636 | 292.59 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 637 | 292.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 640 | 292.68 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 641 | 292.70 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 645 | 292.71 | humidity | 50 | 1440 | > th | dose dependent | sin | 15 | NA |
| 679 | 293.00 | humidity | 80 | 1440 | > th | dose independent | sin | 23 | NA |
| 692 | 293.12 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 710 | 293.27 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 796 | 293.98 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 18 |
| 809 | 294.22 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 830 | 294.36 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 876 | 294.66 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 917 | 294.86 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 933 | 294.96 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |