Os02g0321900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 60S ribosomal protein L10a-1.
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Os02g0321900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 60S ribosomal protein L10a-1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.55 | 0.469 | 11.5 | 0.613 | 0.652 | 0.558 | 1.15 | 0.843 | -0.0837 | 18.9 | 41.16 | 15 | -- | -- |
| 101.08 | 0.468 | 11.5 | 0.628 | 0.65 | 0.55 | 1.03 | -- | -0.0838 | 18.7 | 41.16 | 14 | -- | -- |
| 102.72 | 0.472 | 11.5 | 0.616 | 0.653 | 0.525 | -- | 0.708 | -0.0917 | 18.5 | 41.16 | 15 | -- | -- |
| 103.7 | 0.474 | 11.5 | 0.614 | 0.655 | 0.53 | -- | -- | -0.0797 | 18.5 | 41.3 | 14 | -- | -- |
| 125.18 | 0.521 | 11.5 | 0.576 | -- | 0.487 | -- | 0.619 | -0.0892 | -- | 41.18 | 15 | -- | -- |
| 108.97 | 0.489 | 11.5 | 0.633 | 0.659 | -- | 0.879 | -- | -0.0801 | 17.8 | -- | -- | -- | -- |
| 110.79 | 0.493 | 11.5 | 0.628 | 0.664 | -- | -- | -- | -0.0762 | 17.6 | -- | -- | -- | -- |
| 126.06 | 0.523 | 11.5 | 0.584 | -- | 0.482 | -- | -- | -0.0935 | -- | 41.16 | 14 | -- | -- |
| 113.68 | 0.497 | 11.6 | -- | 0.659 | 0.518 | -- | -- | -0.129 | 18.6 | 41.16 | 14 | -- | -- |
| 133.69 | 0.54 | 11.5 | 0.607 | -- | -- | -- | -- | -0.0922 | -- | -- | -- | -- | -- |
| 121.19 | 0.515 | 11.6 | -- | 0.654 | -- | -- | -- | -0.146 | 17.7 | -- | -- | -- | -- |
| 135.48 | 0.542 | 11.5 | -- | -- | 0.506 | -- | -- | -0.159 | -- | 41.32 | 14 | -- | -- |
| 143.4 | 0.559 | 11.5 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 93.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 7 | 94.23 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 17 | 94.86 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 22 | 95.28 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 23 | 95.31 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 24 | 95.35 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 26 | 95.43 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 29 | 95.53 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 31 | 95.53 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 32 | 95.53 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 33 | 95.53 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 5 |
| 35 | 95.53 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 43 | 95.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 46 | 95.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 55 | 95.72 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 57 | 95.74 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 58 | 95.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 19 |
| 59 | 95.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 19 |
| 61 | 95.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 66 | 95.83 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 70 | 95.90 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 73 | 96.00 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 74 | 96.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 75 | 96.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 76 | 96.03 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 77 | 96.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 80 | 96.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 81 | 96.05 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 82 | 96.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 84 | 96.06 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 87 | 96.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 93 | 96.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 95 | 96.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 97 | 96.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 98 | 96.22 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 109 | 96.28 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 126 | 96.40 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 145 | 96.53 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 162 | 96.67 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 167 | 96.73 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 174 | 96.80 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 8 |
| 175 | 96.81 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 180 | 96.86 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 189 | 96.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 23 |
| 190 | 96.96 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 196 | 97.02 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 197 | 97.02 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 204 | 97.04 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 221 | 97.13 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 235 | 97.19 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 6 |
| 236 | 97.19 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 262 | 97.34 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 18 |
| 265 | 97.34 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 18 |
| 273 | 97.39 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 294 | 97.49 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 296 | 97.50 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 314 | 97.58 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 325 | 97.61 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 341 | 97.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 343 | 97.67 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 344 | 97.67 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 346 | 97.67 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 347 | 97.67 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 348 | 97.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 358 | 97.69 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 23 | 9 |
| 364 | 97.71 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 10 |
| 375 | 97.74 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 393 | 97.75 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 401 | 97.78 | radiation | 20.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 403 | 97.78 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 405 | 97.80 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 413 | 97.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 414 | 97.83 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 415 | 97.83 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 417 | 97.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 419 | 97.85 | humidity | 90.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 422 | 97.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 454 | 97.92 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 470 | 97.94 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 483 | 97.97 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 517 | 98.00 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 519 | 98.01 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 520 | 98.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 523 | 98.01 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 524 | 98.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 543 | 98.06 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 552 | 98.08 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 596 | 98.13 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 18 |
| 605 | 98.14 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 609 | 98.15 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 619 | 98.18 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 625 | 98.20 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 626 | 98.20 | radiation | 40.0 | 10 | < th | dose independent | rect. | 23 | 21 |
| 634 | 98.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 646 | 98.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 648 | 98.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 653 | 98.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 666 | 98.25 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 669 | 98.26 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 8 |
| 697 | 98.31 | radiation | 40.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 698 | 98.31 | wind | 3.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 704 | 98.32 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 7 |
| 714 | 98.35 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 730 | 98.37 | radiation | 30.0 | 90 | < th | dose independent | rect. | 23 | 10 |
| 733 | 98.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 738 | 98.38 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 751 | 98.41 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 753 | 98.41 | wind | 9.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 754 | 98.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 760 | 98.43 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 761 | 98.43 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 788 | 98.49 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 793 | 98.49 | radiation | 40.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 811 | 98.53 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 857 | 98.58 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 903 | 98.63 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 917 | 98.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 920 | 98.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |