Os02g0321600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0321600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.47 | 0.588 | 4.57 | -0.233 | 0.845 | 0.765 | -1.61 | 0.788 | -0.125 | 19.3 | 24.5 | 9 | -- | -- |
| 156.8 | 0.583 | 4.58 | -0.312 | 0.848 | 0.826 | -1.63 | -- | -0.143 | 19.3 | 24.6 | 10 | -- | -- |
| 163.26 | 0.595 | 4.57 | -0.172 | 0.856 | 0.675 | -- | 0.895 | -0.112 | 19 | 24.5 | 6 | -- | -- |
| 163.51 | 0.596 | 4.58 | -0.278 | 0.862 | 0.734 | -- | -- | -0.142 | 19.1 | 24.6 | 6 | -- | -- |
| 190.36 | 0.643 | 4.61 | -0.573 | -- | 1.19 | -- | -1.15 | -0.258 | -- | 24.13 | 293 | -- | -- |
| 168.57 | 0.609 | 4.57 | -0.181 | 1.03 | -- | -1.19 | -- | -0.0665 | 18.3 | -- | -- | -- | -- |
| 171.79 | 0.614 | 4.57 | -0.164 | 1.03 | -- | -- | -- | -0.0694 | 18.1 | -- | -- | -- | -- |
| 190.88 | 0.643 | 4.58 | -0.37 | -- | 1.12 | -- | -- | -0.2 | -- | 24.2 | 293 | -- | -- |
| 165.43 | 0.599 | 4.58 | -- | 0.879 | 0.678 | -- | -- | -0.104 | 19 | 24.69 | 4 | -- | -- |
| 226.37 | 0.703 | 4.55 | -0.193 | -- | -- | -- | -- | -0.0924 | -- | -- | -- | -- | -- |
| 172.5 | 0.614 | 4.56 | -- | 1.03 | -- | -- | -- | -0.0511 | 18.1 | -- | -- | -- | -- |
| 194.49 | 0.65 | 4.56 | -- | -- | 1.06 | -- | -- | -0.153 | -- | 24.3 | 281 | -- | -- |
| 227.35 | 0.704 | 4.54 | -- | -- | -- | -- | -- | -0.071 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.42 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 3 | 152.92 | radiation | 10 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 17 | 153.02 | radiation | 10 | 14400 | > th | dose independent | sin | 16 | NA |
| 46 | 153.15 | radiation | 10 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 50 | 153.19 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 1 |
| 112 | 153.57 | humidity | 80 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 120 | 153.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 146 | 154.25 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 149 | 154.30 | radiation | 10 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 150 | 154.31 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 15 |
| 180 | 154.52 | wind | 7 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 182 | 154.59 | radiation | 40 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 186 | 154.61 | radiation | 10 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 200 | 154.66 | radiation | 10 | 14400 | > th | dose independent | no | NA | NA |
| 327 | 154.82 | radiation | 10 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 329 | 154.83 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 6 |
| 331 | 154.86 | radiation | 40 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 333 | 154.87 | radiation | 40 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 344 | 154.95 | temperature | 20 | 10 | > th | dose dependent | sin | 2 | NA |
| 347 | 154.97 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 402 | 155.11 | wind | 7 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 404 | 155.13 | humidity | 90 | 720 | < th | dose independent | rect. | 6 | 1 |
| 434 | 155.23 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 439 | 155.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 452 | 155.29 | radiation | 10 | 14400 | < th | dose dependent | rect. | 15 | 10 |
| 461 | 155.30 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 470 | 155.30 | radiation | 10 | 14400 | < th | dose dependent | rect. | 15 | 6 |
| 494 | 155.35 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 508 | 155.45 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 525 | 155.47 | radiation | 40 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 531 | 155.49 | radiation | 20 | 14400 | < th | dose dependent | rect. | 13 | 12 |
| 538 | 155.50 | radiation | 20 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 556 | 155.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 627 | 155.65 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 650 | 155.69 | humidity | 80 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 653 | 155.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 657 | 155.72 | radiation | 10 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 670 | 155.76 | radiation | 20 | 14400 | < th | dose dependent | sin | 17 | NA |
| 674 | 155.78 | radiation | 30 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 706 | 155.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 724 | 155.83 | radiation | 30 | 14400 | < th | dose dependent | rect. | 10 | 15 |
| 770 | 155.86 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 7 |
| 799 | 155.90 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 858 | 155.94 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 956 | 156.02 | radiation | 1 | 14400 | > th | dose dependent | rect. | 15 | 1 |