Os02g0318200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0318200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.12 | 0.552 | 6.27 | 3.82 | 1.84 | 0.0392 | 0.29 | 2.74 | 0.872 | 15.5 | 21.6 | 1632 | -- | -- |
| 152.66 | 0.575 | 6.36 | 3.25 | 1.83 | -0.24 | 0.152 | -- | 0.746 | 15.5 | 26.9 | 11297 | -- | -- |
| 138.38 | 0.548 | 6.27 | 3.82 | 1.84 | 0.0425 | -- | 2.75 | 0.873 | 15.5 | 21.6 | 1627 | -- | -- |
| 151.79 | 0.574 | 6.34 | 3.42 | 1.84 | -0.495 | -- | -- | 0.779 | 15.4 | 9.097 | 47520 | -- | -- |
| 321.71 | 0.84 | 6.37 | 3.1 | -- | 0.545 | -- | 1.25 | 0.561 | -- | 21.5 | 1765 | -- | -- |
| 155.26 | 0.584 | 6.37 | 3.02 | 1.84 | -- | 0.335 | -- | 0.665 | 15.5 | -- | -- | -- | -- |
| 155.61 | 0.584 | 6.37 | 3.03 | 1.85 | -- | -- | -- | 0.667 | 15.5 | -- | -- | -- | -- |
| 269.58 | 0.768 | 6.43 | 2.71 | -- | 0.898 | -- | -- | 0.363 | -- | 26.51 | 2698 | -- | -- |
| 223.96 | 0.697 | 6.59 | -- | 1.87 | 1.96 | -- | -- | -0.31 | 15.4 | 21.01 | 47520 | -- | -- |
| 346.46 | 0.87 | 6.37 | 2.95 | -- | -- | -- | -- | 0.618 | -- | -- | -- | -- | -- |
| 397.11 | 0.932 | 6.44 | -- | 1.79 | -- | -- | -- | 0.33 | 15.5 | -- | -- | -- | -- |
| 418.82 | 0.953 | 6.56 | -- | -- | 1.92 | -- | -- | -0.229 | -- | 19.3 | 47520 | -- | -- |
| 575.91 | 1.12 | 6.44 | -- | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.82 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 20 |
| 2 | 137.09 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 4 | 137.32 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 137.35 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 29 | 137.82 | radiation | 20.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 34 | 137.87 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 55 | 138.08 | radiation | 10.0 | 90 | < th | dose independent | rect. | 2 | 20 |
| 68 | 138.17 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 109 | 138.46 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 110 | 138.48 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 129 | 138.60 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 155 | 138.74 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 15 |
| 165 | 138.78 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 169 | 138.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 172 | 138.79 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 179 | 138.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 10 |
| 180 | 138.82 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 218 | 138.96 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 223 | 138.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 238 | 139.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 10 |
| 241 | 139.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 10 |
| 246 | 139.04 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 8 | 13 |
| 269 | 139.10 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 10 |
| 286 | 139.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 287 | 139.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 332 | 139.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 333 | 139.24 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 335 | 139.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 352 | 139.27 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 411 | 139.40 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 413 | 139.40 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 426 | 139.43 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 437 | 139.45 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 22 | 4 |
| 448 | 139.48 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 483 | 139.58 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 6 | NA |
| 503 | 139.61 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 523 | 139.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 551 | 139.74 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 5 | NA |
| 553 | 139.74 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 5 | NA |
| 557 | 139.75 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 5 | NA |
| 578 | 139.78 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 579 | 139.78 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 587 | 139.79 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 702 | 140.04 | temperature | 20.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 716 | 140.06 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 731 | 140.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 785 | 140.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 793 | 140.18 | radiation | 10.0 | 30 | < th | dose independent | rect. | 9 | 13 |
| 815 | 140.22 | temperature | 20.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 817 | 140.22 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 824 | 140.24 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 4 |
| 854 | 140.28 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 2 |
| 859 | 140.29 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 19 | 16 |
| 861 | 140.29 | temperature | 15.0 | 90 | > th | dose independent | rect. | 2 | 20 |
| 885 | 140.32 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 946 | 140.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 4 |