Os02g0317700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0317700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.94 | 0.21 | 12.1 | -0.00114 | 0.702 | -0.701 | -0.515 | 0.738 | -0.0578 | 21.7 | 24.8 | 1379 | -- | -- |
| 20.42 | 0.21 | 12.1 | 0.0937 | 0.715 | -0.813 | -0.568 | -- | -0.0261 | 21.8 | 23.96 | 1499 | -- | -- |
| 20.29 | 0.21 | 12.1 | -0.0879 | 0.573 | -0.658 | -- | 1.36 | -0.0841 | 21.8 | 28.5 | 829 | -- | -- |
| 21.47 | 0.216 | 12.1 | 0.14 | 0.705 | -0.805 | -- | -- | -0.0256 | 21.7 | 23.99 | 1405 | -- | -- |
| 36.92 | 0.283 | 12.1 | -0.239 | -- | -1.14 | -- | 1.86 | -0.135 | -- | 67.07 | 750 | -- | -- |
| 28.43 | 0.25 | 12.1 | 0.359 | 0.707 | -- | -0.506 | -- | 0.128 | 21.9 | -- | -- | -- | -- |
| 29.41 | 0.254 | 12.1 | 0.379 | 0.71 | -- | -- | -- | 0.129 | 21.8 | -- | -- | -- | -- |
| 39.91 | 0.294 | 12.1 | 0.1 | -- | -1.12 | -- | -- | -0.0427 | -- | 37.72 | 753 | -- | -- |
| 21.76 | 0.217 | 12.1 | -- | 0.677 | -0.804 | -- | -- | -0.0428 | 21.8 | 22.98 | 2099 | -- | -- |
| 59.55 | 0.361 | 12.1 | 0.386 | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
| 33.19 | 0.269 | 12.1 | -- | 0.711 | -- | -- | -- | 0.0866 | 21.9 | -- | -- | -- | -- |
| 39.53 | 0.293 | 12.2 | -- | -- | -1.04 | -- | -- | -0.0672 | -- | 28.8 | 766 | -- | -- |
| 63.48 | 0.372 | 12.1 | -- | -- | -- | -- | -- | 0.0855 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 2 | 19.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 7 | 19.62 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 11 | 19.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 19 |
| 38 | 19.74 | temperature | 25 | 1440 | < th | dose dependent | sin | 18 | NA |
| 51 | 19.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 97 | 19.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 11 |
| 135 | 19.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 146 | 19.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 171 | 19.96 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 185 | 19.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 186 | 19.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 205 | 19.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 219 | 19.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 220 | 19.99 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 255 | 20.00 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 413 | 20.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 456 | 20.14 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 473 | 20.16 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 474 | 20.16 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 530 | 20.17 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 538 | 20.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 18 |
| 592 | 20.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 15 |
| 658 | 20.23 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 732 | 20.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 10 |
| 815 | 20.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 817 | 20.29 | temperature | 10 | 1440 | > th | dose dependent | sin | 0 | NA |
| 900 | 20.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 16 |
| 954 | 20.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 20 |
| 956 | 20.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 976 | 20.33 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |