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Os02g0317200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.18 (0.0234) R2 : 0.519
β1 : 1.7 (0.0877) R2dD : 0.454 R2D : 0.141
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.09 (0.0684) R2dE : 0.339 R2E : -0.0464
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.605 (0.0539) R2dN8 : 0.217 R2N8 : -0.115
σ : 0.427
deviance : 84.13
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 25.5
memory length : 8093
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
77.6 0.414 7.12 2.62 0.176 -1.49 0.63 4.54 0.506 9.92 26.29 1188 -- --
83.47 0.426 7.24 1.67 0.23 -1.04 0.179 -- 0.337 9.5 26.08 2445 -- --
78.94 0.414 7.13 2.55 0.181 -1.47 -- 4.08 0.495 8.75 26.2 1184 -- --
80.15 0.417 7.18 1.72 0.282 -1.03 -- -- 0.602 9.79 25.53 8228 -- --
80.06 0.417 7.13 2.55 -- -1.56 -- 4.26 0.501 -- 26.1 1120 -- --
121.29 0.516 7.25 1.27 0.353 -- 0.663 -- 0.24 10.9 -- -- -- --
123.12 0.52 7.25 1.29 0.351 -- -- -- 0.241 10.7 -- -- -- --
84.13 0.427 7.18 1.7 -- -1.09 -- -- 0.605 -- 25.5 8093 -- --
146.59 0.564 7.24 -- 0.295 -0.683 -- -- 0.286 10.1 27.9 8178 -- --
130.73 0.534 7.26 1.29 -- -- -- -- 0.24 -- -- -- -- --
167.15 0.605 7.29 -- 0.342 -- -- -- 0.0975 10.5 -- -- -- --
151.39 0.573 7.25 -- -- -0.714 -- -- 0.288 -- 27.9 8106 -- --
174.33 0.616 7.29 -- -- -- -- -- 0.0969 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.52 wind 9.0 43200 < th dose dependent rect. 11 1
2 71.85 wind 1.0 43200 > th dose dependent rect. 11 1
6 73.49 wind 7.0 43200 > th dose dependent rect. 10 4
7 73.57 humidity 70.0 14400 < th dose independent rect. 18 1
10 73.88 wind 9.0 43200 < th dose independent rect. 9 6
12 74.18 wind 7.0 43200 > th dose dependent rect. 9 6
14 74.27 humidity 70.0 14400 < th dose independent rect. 18 14
17 74.92 wind 9.0 43200 > th dose independent rect. 9 6
24 75.29 humidity 70.0 14400 < th dose independent rect. 17 5
39 75.51 wind 7.0 43200 > th dose independent rect. 5 9
40 75.55 wind 7.0 43200 < th dose independent rect. 10 4
41 75.56 wind 3.0 43200 < th dose independent rect. 2 8
45 75.68 wind 3.0 43200 < th dose independent rect. 2 2
49 75.71 wind 3.0 43200 > th dose independent rect. 2 8
51 75.74 humidity 80.0 43200 < th dose dependent rect. 22 1
52 75.75 wind 9.0 43200 < th dose independent rect. 19 20
54 75.81 wind 7.0 43200 > th dose independent rect. 7 7
71 75.91 wind 3.0 43200 > th dose independent rect. 3 10
72 75.92 wind 7.0 43200 < th dose independent rect. 5 10
77 76.01 wind 9.0 43200 < th dose independent rect. 24 15
80 76.03 wind 9.0 43200 < th dose independent rect. 2 13
100 76.19 wind 3.0 43200 > th dose dependent rect. 5 10
101 76.20 wind 9.0 43200 > th dose independent rect. 19 20
102 76.21 wind 1.0 43200 > th dose dependent rect. 3 11
112 76.24 wind 7.0 43200 > th dose dependent rect. 5 10
115 76.27 humidity 80.0 43200 > th dose independent rect. 4 1
127 76.39 humidity 70.0 14400 > th dose independent rect. 18 14
133 76.40 wind 7.0 43200 > th dose dependent rect. 24 15
135 76.43 wind 3.0 43200 > th dose dependent rect. 3 13
136 76.44 wind 3.0 43200 < th dose independent rect. 3 4
149 76.52 wind 3.0 43200 > th dose independent rect. 3 4
154 76.55 wind 7.0 43200 > th dose independent rect. 24 16
168 76.65 wind 7.0 43200 > th dose independent sin 3 NA
177 76.71 wind 9.0 43200 < th dose dependent rect. 3 11
187 76.82 wind 9.0 43200 < th dose dependent rect. 5 9
197 76.87 wind 9.0 43200 < th dose dependent rect. 6 7
200 76.88 wind 3.0 43200 > th dose dependent rect. 6 1
205 76.91 wind 7.0 43200 < th dose independent sin 3 NA
216 76.95 wind 3.0 43200 < th dose dependent rect. 1 3
219 76.98 humidity 80.0 43200 < th dose independent rect. 4 1
226 77.01 humidity 70.0 14400 < th dose dependent rect. 16 3
240 77.07 wind 1.0 43200 > th dose dependent rect. 24 14
244 77.11 wind 3.0 43200 > th dose independent rect. 6 4
251 77.14 wind 3.0 43200 > th dose independent rect. 6 7
261 77.23 humidity 80.0 43200 < th dose dependent rect. 22 10
279 77.32 wind 3.0 43200 > th dose independent rect. 8 5
285 77.34 humidity 70.0 14400 < th dose dependent rect. 16 15
295 77.40 wind 3.0 43200 < th dose independent rect. 6 4
308 77.42 humidity 70.0 14400 < th dose dependent rect. 16 6
324 77.45 wind 3.0 43200 > th dose independent rect. 2 2
327 77.45 wind 9.0 43200 < th dose dependent rect. 24 14
339 77.48 humidity 70.0 14400 > th dose independent rect. 18 1
391 77.67 wind 3.0 43200 > th dose dependent sin 3 NA
394 77.68 wind 3.0 43200 < th dose independent rect. 6 6
399 77.70 radiation 1.0 4320 < th dose independent rect. 18 8
417 77.75 humidity 70.0 14400 > th dose independent rect. 18 7
452 77.86 radiation 20.0 14400 > th dose dependent rect. 16 1
482 77.93 humidity 90.0 43200 > th dose independent rect. 21 1
491 77.96 precipitation 0.1 43200 < th dose independent rect. 19 1
494 77.96 precipitation 0.1 43200 < th dose dependent rect. 19 1
514 78.02 radiation 1.0 1440 < th dose dependent rect. 18 23
517 78.04 radiation 1.0 4320 < th dose independent rect. 18 2
521 78.05 precipitation 0.1 43200 > th dose dependent rect. 19 2
539 78.11 precipitation 0.1 43200 > th dose independent rect. 19 1
588 78.26 humidity 80.0 43200 < th dose independent rect. 24 1
594 78.27 radiation 1.0 1440 < th dose dependent rect. 18 8
601 78.29 wind 9.0 43200 < th dose dependent sin 4 NA
609 78.31 radiation 1.0 1440 > th dose dependent rect. 17 14
629 78.39 temperature 30.0 14400 < th dose independent rect. 15 1
650 78.46 wind 7.0 43200 > th dose dependent rect. 19 20
657 78.51 radiation 1.0 4320 > th dose independent rect. 18 1
699 78.63 temperature 25.0 1440 > th dose dependent rect. 16 3
709 78.67 temperature 30.0 14400 > th dose independent rect. 15 1
722 78.71 wind 3.0 43200 > th dose independent sin 6 NA
730 78.77 humidity 80.0 14400 > th dose independent rect. 13 7
743 78.82 radiation 40.0 4320 < th dose dependent rect. 18 9
777 78.91 humidity 90.0 43200 < th dose independent rect. 21 1
778 78.91 radiation 1.0 1440 < th dose dependent rect. 18 1
810 79.00 radiation 20.0 1440 < th dose dependent rect. 17 14
815 79.02 humidity 50.0 14400 > th dose dependent rect. 18 1
843 79.06 wind 3.0 43200 < th dose independent sin 6 NA
848 79.07 radiation 1.0 720 < th dose dependent rect. 5 20
874 79.10 radiation 1.0 1440 < th dose dependent rect. 18 20
917 79.20 radiation 20.0 1440 < th dose dependent rect. 18 8
920 79.21 humidity 90.0 43200 < th dose independent rect. 16 12
922 79.21 temperature 25.0 1440 > th dose dependent rect. 7 15
924 79.22 humidity 90.0 43200 < th dose independent rect. 17 16
925 79.22 temperature 25.0 14400 > th dose dependent rect. 17 1
929 79.23 humidity 70.0 14400 < th dose independent sin 13 NA
951 79.27 humidity 80.0 43200 < th dose dependent rect. 24 1
969 79.32 wind 3.0 43200 < th dose dependent rect. 8 1
987 79.35 humidity 90.0 43200 < th dose independent sin 14 NA
988 79.35 humidity 80.0 14400 < th dose independent rect. 13 7
989 79.35 radiation 10.0 1440 < th dose independent rect. 17 14