Os02g0313900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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Os02g0313900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.16 | 0.37 | 7.98 | -0.585 | 0.291 | -1.29 | 0.343 | 1.74 | 0.349 | 23.6 | 22.36 | 412 | -- | -- |
| 63.93 | 0.372 | 8.02 | -0.911 | 0.291 | -1.16 | 0.339 | -- | 0.249 | 23.4 | 22.3 | 412 | -- | -- |
| 62.63 | 0.369 | 7.98 | -0.583 | 0.301 | -1.32 | -- | 1.77 | 0.355 | 23.2 | 22.33 | 422 | -- | -- |
| 64.37 | 0.374 | 8.02 | -0.923 | 0.28 | -1.15 | -- | -- | 0.256 | 23.6 | 22.2 | 407 | -- | -- |
| 65.29 | 0.376 | 7.98 | -0.663 | -- | -1.31 | -- | 1.37 | 0.336 | -- | 22.02 | 247 | -- | -- |
| 88.05 | 0.44 | 8.05 | -1.17 | 0.547 | -- | 0.536 | -- | 0.0721 | 3.73 | -- | -- | -- | -- |
| 88.91 | 0.442 | 8.05 | -1.17 | 0.551 | -- | -- | -- | 0.069 | 3.77 | -- | -- | -- | -- |
| 66.5 | 0.38 | 8.01 | -0.91 | -- | -1.21 | -- | -- | 0.265 | -- | 22 | 233 | -- | -- |
| 85.36 | 0.43 | 7.99 | -- | 0.324 | -1.41 | -- | -- | 0.411 | 22.8 | 21.66 | 455 | -- | -- |
| 105.64 | 0.48 | 8.05 | -1.15 | -- | -- | -- | -- | 0.0837 | -- | -- | -- | -- | -- |
| 125.19 | 0.523 | 8.02 | -- | 0.528 | -- | -- | -- | 0.2 | 3.79 | -- | -- | -- | -- |
| 84.81 | 0.429 | 7.98 | -- | -- | -1.87 | -- | -- | 0.42 | -- | 13.34 | 244 | -- | -- |
| 140.55 | 0.553 | 8.02 | -- | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.41 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 27 | 62.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 21 |
| 36 | 62.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 11 |
| 38 | 63.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 43 | 63.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 53 | 63.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 84 | 63.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 88 | 64.00 | temperature | 20 | 270 | > th | dose dependent | sin | 20 | NA |
| 90 | 64.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 96 | 64.15 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 103 | 64.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 124 | 64.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 169 | 64.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 242 | 65.40 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 19 |
| 253 | 65.45 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 267 | 65.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 279 | 65.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 16 |
| 311 | 65.61 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |
| 545 | 65.92 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 689 | 66.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 780 | 66.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 854 | 66.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 21 |
| 866 | 66.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 962 | 66.53 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 3 |