Os02g0312800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os02g0312800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.93 | 0.531 | 6.51 | 1.25 | 1.75 | 0.915 | -0.105 | -1.31 | 0.172 | 17.9 | 25.5 | 14 | -- | -- |
| 128.56 | 0.528 | 6.49 | 1.39 | 1.75 | 0.815 | -0.225 | -- | 0.207 | 17.9 | 25.5 | 13 | -- | -- |
| 127.96 | 0.527 | 6.51 | 1.25 | 1.75 | 0.912 | -- | -1.36 | 0.171 | 17.9 | 25.5 | 13 | -- | -- |
| 128.66 | 0.528 | 6.49 | 1.39 | 1.76 | 0.791 | -- | -- | 0.209 | 17.9 | 25.5 | 13 | -- | -- |
| 226.6 | 0.701 | 6.54 | 0.945 | -- | 2.05 | -- | -1.56 | -0.041 | -- | 24.3 | 265 | -- | -- |
| 137.98 | 0.551 | 6.48 | 1.51 | 1.98 | -- | 0.143 | -- | 0.256 | 17.5 | -- | -- | -- | -- |
| 138.03 | 0.55 | 6.48 | 1.51 | 1.98 | -- | -- | -- | 0.257 | 17.5 | -- | -- | -- | -- |
| 231.15 | 0.708 | 6.5 | 1.12 | -- | 1.98 | -- | -- | 0.0183 | -- | 24.3 | 252 | -- | -- |
| 177.76 | 0.621 | 6.53 | -- | 1.64 | 1.14 | -- | -- | 0.0352 | 18.1 | 25.41 | 13 | -- | -- |
| 342.02 | 0.864 | 6.45 | 1.44 | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
| 198.05 | 0.658 | 6.52 | -- | 1.96 | -- | -- | -- | 0.0885 | 17.5 | -- | -- | -- | -- |
| 263.61 | 0.756 | 6.52 | -- | -- | 2.13 | -- | -- | -0.125 | -- | 24.2 | 252 | -- | -- |
| 396.98 | 0.93 | 6.49 | -- | -- | -- | -- | -- | 0.048 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.57 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 2 | 115.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 15 | 116.86 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 19 |
| 17 | 116.90 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 20 | 117.04 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 23 | 117.19 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 24 | 117.22 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 25 | 117.24 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 11 |
| 30 | 117.39 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 34 | 117.48 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 43 | 117.75 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 47 | 117.79 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 56 | 117.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 14 |
| 59 | 118.05 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 60 | 118.07 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 64 | 118.12 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 78 | 118.34 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 87 | 118.48 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 95 | 118.60 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 112 | 118.78 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 119 | 118.86 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 148 | 119.20 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 179 | 119.44 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 219 | 119.70 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 234 | 119.84 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 236 | 119.84 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 247 | 119.91 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 287 | 120.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 289 | 120.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 304 | 120.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 305 | 120.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 309 | 120.32 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 380 | 120.81 | temperature | 25.0 | 270 | < th | dose independent | sin | 5 | NA |
| 389 | 120.83 | temperature | 25.0 | 270 | > th | dose independent | sin | 5 | NA |
| 395 | 120.85 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 399 | 120.87 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 416 | 120.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 418 | 120.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 419 | 120.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 422 | 120.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 423 | 120.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 424 | 120.96 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 427 | 120.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 447 | 121.10 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 455 | 121.13 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 462 | 121.18 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 473 | 121.21 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 485 | 121.25 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 490 | 121.28 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 514 | 121.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 526 | 121.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 528 | 121.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 529 | 121.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 532 | 121.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 533 | 121.43 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 535 | 121.43 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 538 | 121.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 555 | 121.45 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 19 |
| 557 | 121.45 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 560 | 121.45 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 592 | 121.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 598 | 121.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 600 | 121.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 5 |
| 603 | 121.53 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 23 | 5 |
| 604 | 121.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 608 | 121.55 | temperature | 30.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 613 | 121.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 13 |
| 627 | 121.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 629 | 121.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 630 | 121.59 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 632 | 121.59 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 633 | 121.59 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 634 | 121.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 638 | 121.60 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 673 | 121.68 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 4 |
| 695 | 121.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 729 | 121.81 | wind | 9.0 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 774 | 121.94 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 783 | 121.96 | temperature | 25.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 794 | 122.01 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 23 | 5 |
| 813 | 122.07 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 877 | 122.23 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 883 | 122.25 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 890 | 122.26 | wind | 5.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 904 | 122.28 | temperature | 15.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 911 | 122.29 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 936 | 122.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 942 | 122.37 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 945 | 122.39 | temperature | 20.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 967 | 122.44 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 968 | 122.45 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 969 | 122.45 | temperature | 25.0 | 10 | < th | dose independent | rect. | 23 | 5 |
| 971 | 122.45 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 974 | 122.45 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 975 | 122.45 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 981 | 122.45 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 983 | 122.45 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 984 | 122.45 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 988 | 122.45 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 993 | 122.46 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 999 | 122.47 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 4 |