Os02g0310200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0310200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.85 | 0.322 | 12.9 | -0.221 | 1.51 | 0.778 | 0.445 | -1.04 | 0.674 | 19.1 | 72.51 | 1340 | -- | -- |
| 49.01 | 0.326 | 12.9 | -0.293 | 1.5 | 0.804 | 0.452 | -- | 0.668 | 19.2 | 79.99 | 1317 | -- | -- |
| 47.28 | 0.32 | 12.9 | -0.229 | 1.53 | 0.793 | -- | -1.1 | 0.674 | 19.2 | 119.6 | 1314 | -- | -- |
| 49.5 | 0.328 | 12.9 | -0.36 | 1.54 | 0.756 | -- | -- | 0.622 | 19.2 | 277.8 | 1307 | -- | -- |
| 161.89 | 0.593 | 12.9 | -0.192 | -- | 0.779 | -- | -1.27 | 0.693 | -- | 125.3 | 1443 | -- | -- |
| 67.47 | 0.385 | 12.9 | -0.467 | 1.47 | -- | 0.501 | -- | 0.451 | 18.8 | -- | -- | -- | -- |
| 68.11 | 0.386 | 12.9 | -0.475 | 1.47 | -- | -- | -- | 0.452 | 18.8 | -- | -- | -- | -- |
| 162.95 | 0.595 | 12.9 | -0.396 | -- | 0.687 | -- | -- | 0.602 | -- | 308.6 | 1466 | -- | -- |
| 52.93 | 0.339 | 12.9 | -- | 1.54 | 0.788 | -- | -- | 0.673 | 19.2 | 223.2 | 1314 | -- | -- |
| 181.69 | 0.63 | 12.9 | -0.509 | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
| 74.06 | 0.403 | 12.9 | -- | 1.48 | -- | -- | -- | 0.505 | 18.7 | -- | -- | -- | -- |
| 167.06 | 0.602 | 12.9 | -- | -- | 0.734 | -- | -- | 0.655 | -- | 328.1 | 1461 | -- | -- |
| 188.52 | 0.641 | 12.9 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 3 | 46.67 | humidity | 50 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 12 | 46.99 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 16 | 47.11 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 8 |
| 43 | 47.62 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 61 | 47.84 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 66 | 47.90 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 72 | 47.94 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 22 |
| 83 | 48.04 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 101 | 48.20 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 107 | 48.23 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 120 | 48.30 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 130 | 48.35 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 158 | 48.43 | radiation | 30 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 192 | 48.49 | radiation | 10 | 1440 | > th | dose dependent | sin | 5 | NA |
| 193 | 48.49 | radiation | 40 | 1440 | < th | dose dependent | sin | 3 | NA |
| 226 | 48.52 | radiation | 40 | 1440 | < th | dose dependent | rect. | 23 | 21 |
| 230 | 48.53 | radiation | 40 | 1440 | < th | dose dependent | rect. | 5 | 15 |
| 232 | 48.53 | radiation | 40 | 1440 | < th | dose dependent | rect. | 1 | 19 |
| 237 | 48.53 | radiation | 40 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 240 | 48.54 | radiation | 40 | 1440 | < th | dose dependent | no | NA | NA |
| 260 | 48.54 | radiation | 40 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 272 | 48.54 | radiation | 40 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 277 | 48.54 | radiation | 40 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 314 | 48.55 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 318 | 48.56 | radiation | 20 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 334 | 48.56 | radiation | 40 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 339 | 48.57 | radiation | 1 | 1440 | > th | dose dependent | rect. | 6 | 12 |
| 402 | 48.59 | radiation | 1 | 1440 | > th | dose dependent | no | NA | NA |
| 534 | 48.64 | radiation | 20 | 1440 | > th | dose independent | sin | 5 | NA |
| 535 | 48.64 | radiation | 10 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 644 | 48.66 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 762 | 48.72 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 903 | 48.82 | radiation | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 989 | 48.83 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 18 |