Os02g0308800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0308800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.11 | 0.448 | 3.19 | -0.625 | 0.0842 | 3.65 | -0.153 | -20.3 | 0.0424 | 6.04 | 998.1 | 1622 | -- | -- |
| 91.87 | 0.446 | 3.11 | -0.181 | 0.122 | 2.42 | -0.297 | -- | 0.097 | 4.1 | 994.6 | 1890 | -- | -- |
| 91.15 | 0.445 | 3.19 | -0.603 | 0.0826 | 3.44 | -- | -19.2 | 0.0455 | 6.43 | 998.1 | 1648 | -- | -- |
| 91.14 | 0.445 | 3.13 | -0.216 | 0.085 | 2.06 | -- | -- | 0.0494 | 6.29 | 994.8 | 2028 | -- | -- |
| 91.5 | 0.446 | 3.18 | -0.591 | -- | 3.65 | -- | -20.3 | 0.0462 | -- | 997.8 | 1661 | -- | -- |
| 103.59 | 0.477 | 3.13 | -0.275 | 0.0985 | -- | -0.185 | -- | 0.0179 | 8.15 | -- | -- | -- | -- |
| 103.7 | 0.477 | 3.13 | -0.28 | 0.099 | -- | -- | -- | 0.0179 | 8.04 | -- | -- | -- | -- |
| 91.51 | 0.446 | 3.13 | -0.21 | -- | 2.07 | -- | -- | 0.0475 | -- | 994.9 | 2127 | -- | -- |
| 92.3 | 0.447 | 3.12 | -- | 0.0831 | 2.13 | -- | -- | 0.0692 | 6.34 | 994.9 | 2525 | -- | -- |
| 104.23 | 0.477 | 3.14 | -0.279 | -- | -- | -- | -- | 0.0192 | -- | -- | -- | -- | -- |
| 105.76 | 0.481 | 3.13 | -- | 0.0974 | -- | -- | -- | 0.0491 | 8.25 | -- | -- | -- | -- |
| 92.66 | 0.448 | 3.12 | -- | -- | 2.14 | -- | -- | 0.0708 | -- | 994.9 | 2390 | -- | -- |
| 106.29 | 0.481 | 3.13 | -- | -- | -- | -- | -- | 0.0502 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.07 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 3 | 91.09 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 4 | 91.13 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 5 | 91.14 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 91.19 | wind | 9 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 7 | 91.19 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 12 | 91.19 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 159 | 91.19 | wind | 9 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 160 | 91.19 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 165 | 91.19 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 314 | 91.26 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 319 | 91.36 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 15 |
| 333 | 91.47 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 13 |
| 340 | 91.51 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 367 | 91.62 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 386 | 91.67 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 23 | 12 |
| 387 | 91.67 | atmosphere | 1000 | 1440 | < th | dose dependent | sin | 21 | NA |
| 470 | 91.83 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 523 | 91.94 | atmosphere | 995 | 4320 | < th | dose dependent | sin | 8 | NA |
| 640 | 92.19 | atmosphere | 1000 | 1440 | < th | dose dependent | no | NA | NA |
| 658 | 92.25 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 677 | 92.36 | radiation | 30 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 774 | 92.96 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 815 | 93.39 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 868 | 93.84 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 885 | 93.94 | atmosphere | 1000 | 1440 | < th | dose independent | sin | 14 | NA |
| 916 | 94.09 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 938 | 94.19 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 6 | 6 |
| 941 | 94.21 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 949 | 94.24 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 12 | 11 |
| 952 | 94.25 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 12 | 9 |
| 989 | 94.31 | atmosphere | 1000 | 1440 | > th | dose independent | sin | 13 | NA |