Os02g0306300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os02g0306300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 426.25 | 0.97 | 4.93 | 2.8 | 0.71 | 1.51 | 1.07 | 0.823 | 0.827 | 8.63 | 29.97 | 1468 | -- | -- |
| 426.36 | 0.962 | 4.92 | 2.97 | 0.708 | 1.61 | 1.08 | -- | 0.828 | 8.58 | 30 | 1468 | -- | -- |
| 429.45 | 0.965 | 4.94 | 2.86 | 0.701 | 1.61 | -- | 0.815 | 0.83 | 9.11 | 30 | 1527 | -- | -- |
| 428.13 | 0.964 | 4.92 | 2.98 | 0.66 | 1.89 | -- | -- | 0.788 | 9.71 | 30.04 | 1689 | -- | -- |
| 446.54 | 0.984 | 4.95 | 2.89 | -- | 2 | -- | 0.64 | 0.8 | -- | 29.98 | 2274 | -- | -- |
| 549.23 | 1.1 | 4.86 | 2.46 | 0.76 | -- | 0.883 | -- | 1.07 | 9.52 | -- | -- | -- | -- |
| 551.96 | 1.1 | 4.86 | 2.49 | 0.753 | -- | -- | -- | 1.07 | 9.79 | -- | -- | -- | -- |
| 444.1 | 0.981 | 4.91 | 3.02 | -- | 2.11 | -- | -- | 0.945 | -- | 29.79 | 2206 | -- | -- |
| 653.39 | 1.19 | 5.02 | -- | 0.58 | 1.52 | -- | -- | 0.628 | 9.25 | 30.7 | 1930 | -- | -- |
| 585.8 | 1.13 | 4.88 | 2.49 | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
| 715.96 | 1.25 | 4.92 | -- | 0.748 | -- | -- | -- | 0.792 | 9.54 | -- | -- | -- | -- |
| 671.92 | 1.21 | 4.93 | -- | -- | 1.45 | -- | -- | 0.856 | -- | 29.29 | 2254 | -- | -- |
| 748.96 | 1.28 | 4.94 | -- | -- | -- | -- | -- | 0.795 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 420.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 2 | 420.87 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 6 | 421.30 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 7 | 421.45 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 19 | 423.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 27 | 423.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 28 | 423.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 82 | 424.63 | temperature | 30.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 114 | 424.99 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 122 | 425.19 | temperature | 30.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 215 | 426.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 221 | 426.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 256 | 426.15 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 269 | 426.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 20 |
| 296 | 426.36 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 299 | 426.45 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 308 | 426.48 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 361 | 426.55 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 362 | 426.56 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 369 | 426.56 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 403 | 426.78 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 547 | 427.63 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 555 | 427.74 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 556 | 427.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 564 | 428.11 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 573 | 428.48 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 577 | 428.73 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 13 |
| 579 | 428.76 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 599 | 428.92 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 618 | 429.33 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 650 | 430.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 653 | 430.04 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 662 | 430.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 663 | 430.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 686 | 430.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 693 | 430.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 801 | 431.73 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 802 | 431.75 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 865 | 432.22 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 884 | 432.48 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 903 | 432.60 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 905 | 432.62 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 909 | 432.65 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 933 | 432.78 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 944 | 432.83 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 959 | 433.00 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 14 |