Os02g0306100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0306100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.89 | 0.261 | 9.7 | 0.000995 | 0.311 | 0.384 | 0.145 | 0.532 | 0.0117 | 3.16 | 80 | 753 | -- | -- |
| 31.53 | 0.262 | 9.7 | -0.00757 | 0.312 | 0.388 | 0.133 | -- | 0.00903 | 3.07 | 80 | 753 | -- | -- |
| 30.95 | 0.259 | 9.7 | -0.000216 | 0.304 | 0.374 | -- | 0.55 | 0.0116 | 3 | 79.89 | 763 | -- | -- |
| 31.58 | 0.262 | 9.7 | -0.043 | 0.306 | 0.377 | -- | -- | 0.00334 | 3.05 | 79.99 | 755 | -- | -- |
| 33.65 | 0.27 | 9.7 | 0.0142 | -- | 0.564 | -- | 0.628 | -0.00126 | -- | 79.7 | 1030 | -- | -- |
| 34.45 | 0.275 | 9.7 | -0.017 | 0.343 | -- | 0.11 | -- | 0.0181 | 0.437 | -- | -- | -- | -- |
| 34.5 | 0.275 | 9.7 | -0.0212 | 0.343 | -- | -- | -- | 0.0175 | 0.438 | -- | -- | -- | -- |
| 33.84 | 0.271 | 9.71 | -0.0398 | -- | 0.59 | -- | -- | -0.00871 | -- | 78 | 1024 | -- | -- |
| 31.54 | 0.262 | 9.7 | -- | 0.322 | 0.371 | -- | -- | 0.016 | 3.04 | 78.94 | 754 | -- | -- |
| 41.89 | 0.302 | 9.7 | -0.00952 | -- | -- | -- | -- | 0.0231 | -- | -- | -- | -- | -- |
| 34.51 | 0.275 | 9.7 | -- | 0.343 | -- | -- | -- | 0.0199 | 0.435 | -- | -- | -- | -- |
| 33.89 | 0.271 | 9.7 | -- | -- | 0.595 | -- | -- | 0.00235 | -- | 78.7 | 1024 | -- | -- |
| 41.89 | 0.302 | 9.7 | -- | -- | -- | -- | -- | 0.0242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 5 | 28.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 6 | 29.00 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 16 | 29.05 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 53 | 29.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 55 | 29.27 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 56 | 29.28 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 57 | 29.28 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 61 | 29.28 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 72 | 29.34 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 73 | 29.34 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 82 | 29.37 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 89 | 29.42 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 125 | 29.59 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 152 | 29.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 154 | 29.68 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 158 | 29.69 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 163 | 29.71 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 193 | 29.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 195 | 29.83 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 196 | 29.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 200 | 29.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 206 | 29.86 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 210 | 29.86 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 214 | 29.87 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 218 | 29.88 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 234 | 29.93 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 254 | 29.99 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 269 | 30.01 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 281 | 30.03 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 285 | 30.04 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 325 | 30.08 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 335 | 30.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 357 | 30.13 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 362 | 30.13 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 379 | 30.15 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 401 | 30.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 453 | 30.23 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 459 | 30.23 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 481 | 30.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 12 |
| 507 | 30.29 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 529 | 30.31 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 533 | 30.31 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 534 | 30.31 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 538 | 30.31 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 552 | 30.33 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 574 | 30.35 | humidity | 80.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 587 | 30.35 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 616 | 30.38 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 620 | 30.38 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 24 | 23 |
| 625 | 30.38 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 627 | 30.38 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 684 | 30.43 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 690 | 30.43 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 7 | 10 |
| 757 | 30.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 764 | 30.49 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 1 |
| 765 | 30.49 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 780 | 30.50 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 801 | 30.51 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 818 | 30.52 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 833 | 30.52 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 9 |
| 844 | 30.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 11 |
| 864 | 30.54 | humidity | 80.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 914 | 30.57 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 930 | 30.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 959 | 30.59 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 967 | 30.59 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 998 | 30.61 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |