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Os02g0303500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Eggshell protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.68 (0.0465) R2 : 0.573
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.15 (0.108) R2dC : 0.108 R2C : 0.0814
β3 : 2.84 (0.137) R2dE : 0.524 R2E : 0.462
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.166 (0.108) R2dN8 : 0.00376 R2N8 : -0.0342
σ : 0.846
deviance : 329.79
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_____
C
peak time of C : 11.3
E
wheather : temperature
threshold : 23.1
memory length : 9914
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
321.05 0.842 8.71 -0.183 1.19 2.43 0.654 -3.29 0.0244 11.2 25.3 8498 -- --
320.89 0.834 8.65 0.602 1.17 2.59 0.909 -- -0.0125 11.1 23.5 9913 -- --
322.53 0.836 8.71 -0.152 1.17 2.44 -- -3.22 0.034 11.3 25.2 8569 -- --
322.5 0.836 8.65 0.641 1.15 2.58 -- -- -0.0272 11.4 23.5 9924 -- --
404.59 0.937 8.72 -0.091 -- 2.36 -- -3.16 0.0467 -- 25.11 8768 -- --
522.3 1.07 8.38 2.07 1.06 -- 0.681 -- 1.13 10.7 -- -- -- --
524.08 1.07 8.38 2.1 1.06 -- -- -- 1.13 10.8 -- -- -- --
404.5 0.937 8.66 0.681 -- 2.49 -- -- -0.0403 -- 23.5 10073 -- --
329.79 0.846 8.68 -- 1.15 2.84 -- -- -0.166 11.3 23.1 9914 -- --
593.28 1.14 8.41 2.08 -- -- -- -- 1.13 -- -- -- -- --
640.1 1.18 8.43 -- 1.04 -- -- -- 0.9 10.7 -- -- -- --
410.83 0.944 8.69 -- -- 2.78 -- -- -0.131 -- 22.9 10044 -- --
706.96 1.24 8.46 -- -- -- -- -- 0.897 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 323.17 wind 3 43200 > th dose independent rect. 9 1
2 325.64 wind 3 43200 < th dose independent rect. 9 1
3 326.53 wind 3 43200 > th dose dependent rect. 20 1
4 326.65 humidity 80 43200 < th dose independent rect. 21 2
5 327.60 humidity 80 43200 > th dose independent rect. 2 1
6 327.84 wind 1 43200 < th dose dependent rect. 1 1
8 329.93 radiation 40 43200 < th dose independent rect. 10 1
11 330.90 temperature 20 14400 > th dose dependent rect. 17 1
12 331.01 wind 9 43200 < th dose dependent rect. 20 1
13 331.60 temperature 25 14400 > th dose independent rect. 17 1
14 331.78 humidity 80 43200 < th dose independent rect. 4 1
15 331.79 humidity 80 43200 < th dose independent rect. 2 3
18 332.16 radiation 1 14400 < th dose dependent rect. 2 3
24 332.36 temperature 25 14400 < th dose independent rect. 17 1
27 332.69 wind 5 43200 > th dose dependent rect. 10 11
28 332.75 radiation 1 14400 < th dose dependent rect. 4 1
35 333.14 wind 5 43200 < th dose independent rect. 19 2
37 333.29 radiation 1 1440 < th dose dependent rect. 18 10
43 333.96 humidity 80 43200 < th dose independent rect. 21 10
44 334.01 temperature 25 14400 < th dose independent rect. 10 10
46 334.10 radiation 1 1440 < th dose dependent rect. 18 1
48 334.17 temperature 25 14400 > th dose independent rect. 10 10
49 334.18 wind 5 43200 > th dose dependent rect. 9 9
51 334.25 temperature 25 14400 < th dose independent rect. 11 1
52 334.26 radiation 20 43200 < th dose independent rect. 8 1
54 334.29 wind 5 43200 > th dose dependent sin 21 NA
55 334.29 radiation 1 1440 < th dose dependent rect. 18 6
62 334.40 temperature 25 14400 > th dose independent rect. 10 5
66 334.44 radiation 1 1440 < th dose dependent rect. 18 3
70 334.49 humidity 80 43200 > th dose independent rect. 23 6
77 334.62 temperature 20 14400 > th dose independent rect. 18 5
80 334.65 temperature 25 14400 < th dose independent rect. 13 7
85 334.77 temperature 25 14400 > th dose independent rect. 13 1
86 334.78 temperature 25 14400 > th dose independent rect. 13 7
106 335.03 temperature 20 14400 > th dose independent rect. 18 7
126 335.50 temperature 20 14400 < th dose independent rect. 19 4
134 335.61 wind 5 43200 > th dose independent rect. 19 2
147 335.76 temperature 25 14400 > th dose independent rect. 11 1
149 335.78 wind 3 43200 > th dose dependent rect. 3 14
158 335.88 wind 3 43200 < th dose dependent rect. 8 2
178 336.09 temperature 25 4320 < th dose independent rect. 7 6
179 336.10 temperature 20 14400 < th dose independent rect. 21 1
186 336.18 wind 5 43200 > th dose independent rect. 9 14
192 336.24 temperature 20 1440 > th dose dependent rect. 11 10
198 336.29 wind 5 43200 > th dose dependent rect. 5 16
203 336.37 humidity 80 43200 > th dose independent rect. 21 2
221 336.60 wind 7 43200 > th dose independent rect. 2 16
243 336.81 radiation 40 43200 > th dose independent rect. 10 1
257 336.94 wind 5 43200 > th dose independent rect. 5 17
258 336.94 temperature 25 14400 < th dose dependent rect. 18 1
271 337.04 wind 5 43200 < th dose independent rect. 5 17
292 337.24 wind 7 43200 < th dose independent rect. 4 14
298 337.28 radiation 10 43200 < th dose dependent rect. 9 1
344 337.56 temperature 25 14400 < th dose independent rect. 13 1
345 337.56 wind 5 43200 < th dose independent rect. 9 14
349 337.58 temperature 25 4320 > th dose independent rect. 7 6
360 337.61 temperature 25 14400 < th dose dependent rect. 17 5
362 337.62 temperature 25 1440 > th dose dependent sin 19 NA
380 337.72 temperature 20 1440 > th dose dependent rect. 13 8
397 337.81 radiation 10 43200 > th dose independent rect. 9 1
424 337.97 temperature 20 14400 < th dose independent rect. 18 7
470 338.14 temperature 25 1440 > th dose dependent rect. 16 4
508 338.33 temperature 25 1440 > th dose dependent rect. 10 19
539 338.46 temperature 25 14400 < th dose independent sin 21 NA
588 338.67 humidity 90 43200 > th dose dependent rect. 21 1
637 338.87 wind 7 43200 > th dose independent sin 0 NA
642 338.88 wind 7 43200 < th dose independent sin 0 NA
646 338.90 temperature 25 14400 > th dose independent sin 20 NA
680 339.01 radiation 40 43200 > th dose dependent rect. 10 1
712 339.14 humidity 80 43200 < th dose dependent rect. 21 11
717 339.15 radiation 1 1440 < th dose dependent rect. 17 21
780 339.38 wind 5 43200 > th dose dependent rect. 12 4
794 339.44 temperature 25 1440 > th dose dependent rect. 2 19
872 339.69 radiation 1 1440 < th dose dependent sin 13 NA
909 339.83 radiation 20 43200 < th dose independent rect. 6 4
932 339.89 radiation 20 43200 < th dose independent rect. 4 6
933 339.89 temperature 25 14400 < th dose dependent rect. 21 1
943 339.90 radiation 20 43200 < th dose independent rect. 18 16