Os02g0303200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0303200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 264.54 | 0.764 | 4.89 | -0.136 | 1.94 | 1.51 | -0.153 | -3.04 | 0.146 | 5.29 | 23.48 | 1185 | -- | -- |
| 269.6 | 0.765 | 4.79 | 0.671 | 1.93 | 1.28 | 0.002 | -- | 0.4 | 5.22 | 23.16 | 1199 | -- | -- |
| 264.44 | 0.757 | 4.89 | -0.113 | 1.94 | 1.48 | -- | -2.85 | 0.136 | 5.26 | 23.1 | 1201 | -- | -- |
| 269.11 | 0.764 | 4.8 | 0.673 | 1.94 | 1.22 | -- | -- | 0.343 | 5.22 | 22.78 | 1203 | -- | -- |
| 456.11 | 0.995 | 4.93 | -0.188 | -- | 1.81 | -- | -3.14 | 0.153 | -- | 23.88 | 1258 | -- | -- |
| 317.44 | 0.835 | 4.75 | 1.07 | 2.06 | -- | -0.168 | -- | 0.589 | 4.86 | -- | -- | -- | -- |
| 317.52 | 0.834 | 4.74 | 1.07 | 2.06 | -- | -- | -- | 0.59 | 4.87 | -- | -- | -- | -- |
| 461.31 | 1 | 4.82 | 0.654 | -- | 1.5 | -- | -- | 0.391 | -- | 23.8 | 1258 | -- | -- |
| 280.43 | 0.78 | 4.81 | -- | 1.93 | 1.38 | -- | -- | 0.279 | 5.26 | 22.03 | 1194 | -- | -- |
| 541.36 | 1.09 | 4.76 | 1.15 | -- | -- | -- | -- | 0.643 | -- | -- | -- | -- | -- |
| 347.73 | 0.872 | 4.77 | -- | 2.08 | -- | -- | -- | 0.471 | 4.85 | -- | -- | -- | -- |
| 471.57 | 1.01 | 4.85 | -- | -- | 1.64 | -- | -- | 0.277 | -- | 23.5 | 1260 | -- | -- |
| 576.06 | 1.12 | 4.79 | -- | -- | -- | -- | -- | 0.516 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 259.62 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 2 | 260.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 8 | 260.88 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 23 | 263.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 35 | 265.03 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 36 | 265.06 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 3 |
| 39 | 265.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 44 | 265.64 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 47 | 265.85 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 54 | 266.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 58 | 266.34 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 65 | 266.49 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 72 | 266.59 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 77 | 266.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 14 |
| 88 | 266.72 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 93 | 266.74 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 108 | 266.77 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 116 | 266.78 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 121 | 266.81 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 126 | 266.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 140 | 266.87 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 145 | 266.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 152 | 266.91 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 158 | 266.93 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 206 | 267.36 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 207 | 267.38 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 225 | 267.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 235 | 267.56 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 239 | 267.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 254 | 267.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 9 |
| 264 | 267.73 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 268 | 267.74 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 290 | 267.79 | radiation | 1 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 303 | 267.91 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 312 | 267.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 335 | 268.02 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 13 |
| 341 | 268.03 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 357 | 268.12 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 371 | 268.22 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 373 | 268.24 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 13 |
| 486 | 268.46 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 522 | 268.57 | temperature | 25 | 4320 | < th | dose independent | sin | 23 | NA |
| 534 | 268.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 548 | 268.63 | temperature | 25 | 4320 | > th | dose independent | sin | 23 | NA |
| 553 | 268.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 572 | 268.71 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 579 | 268.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 607 | 268.83 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 624 | 268.91 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 8 |
| 633 | 268.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 8 |
| 656 | 269.02 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 667 | 269.07 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 695 | 269.17 | radiation | 40 | 14400 | < th | dose dependent | rect. | 16 | 14 |
| 729 | 269.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 735 | 269.34 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 768 | 269.45 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 804 | 269.58 | radiation | 40 | 14400 | < th | dose dependent | rect. | 16 | 11 |
| 806 | 269.60 | radiation | 40 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 814 | 269.62 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 815 | 269.62 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 816 | 269.62 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 817 | 269.62 | radiation | 40 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 872 | 269.73 | wind | 9 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 877 | 269.74 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 879 | 269.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 885 | 269.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 20 |
| 910 | 269.82 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 945 | 269.89 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |