Os02g0302200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0302200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.18 | 0.388 | 3.07 | -0.00942 | 0.181 | 0.465 | -0.472 | -1.08 | 0.242 | 19.6 | 1014 | 1192 | -- | -- |
| 68.26 | 0.385 | 3.08 | -0.0206 | 0.181 | 0.988 | -0.44 | -- | 0.238 | 19.6 | 1016 | 756 | -- | -- |
| 68.77 | 0.386 | 3.07 | 0.00899 | 0.178 | 0.443 | -- | -1.05 | 0.244 | 19.7 | 1013 | 1262 | -- | -- |
| 68.83 | 0.386 | 3.07 | 0.0108 | 0.178 | 0.956 | -- | -- | 0.237 | 19.8 | 1016 | 673 | -- | -- |
| 70.49 | 0.391 | 3.07 | 0.00373 | -- | 0.424 | -- | -1.04 | 0.24 | -- | 1013 | 1295 | -- | -- |
| 71.02 | 0.395 | 3.08 | -0.06 | 0.174 | -- | -0.445 | -- | 0.225 | 19 | -- | -- | -- | -- |
| 71.5 | 0.396 | 3.08 | -0.0523 | 0.173 | -- | -- | -- | 0.223 | 19.5 | -- | -- | -- | -- |
| 70.57 | 0.391 | 3.07 | 0.0168 | -- | 0.928 | -- | -- | 0.233 | -- | 1016 | 639 | -- | -- |
| 68.83 | 0.386 | 3.07 | -- | 0.179 | 0.936 | -- | -- | 0.238 | 19.8 | 1016 | 687 | -- | -- |
| 73.11 | 0.4 | 3.07 | -0.0549 | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
| 71.58 | 0.396 | 3.08 | -- | 0.174 | -- | -- | -- | 0.229 | 19.5 | -- | -- | -- | -- |
| 70.57 | 0.391 | 3.07 | -- | -- | 0.899 | -- | -- | 0.236 | -- | 1016 | 670 | -- | -- |
| 73.19 | 0.399 | 3.07 | -- | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.02 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 3 |
| 4 | 64.18 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 9 | 64.34 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 36 | 64.86 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 11 |
| 38 | 64.89 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 43 | 65.02 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 49 | 65.17 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 12 |
| 53 | 65.20 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 56 | 65.27 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 3 |
| 57 | 65.28 | wind | 7.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 60 | 65.28 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 71 | 65.32 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 81 | 65.42 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 82 | 65.42 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 83 | 65.42 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 85 | 65.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 87 | 65.44 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 116 | 65.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 126 | 65.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 14 |
| 144 | 65.57 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 149 | 65.58 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 19 |
| 151 | 65.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 187 | 65.60 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 194 | 65.61 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 8 | NA |
| 195 | 65.61 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 2 | NA |
| 196 | 65.61 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 8 | NA |
| 197 | 65.61 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 2 | NA |
| 202 | 65.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 205 | 65.61 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 206 | 65.61 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 8 | NA |
| 207 | 65.61 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 2 | NA |
| 208 | 65.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 14 |
| 217 | 65.63 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 8 | NA |
| 236 | 65.64 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 237 | 65.64 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 296 | 65.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 310 | 65.71 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 314 | 65.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 335 | 65.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 379 | 65.75 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 428 | 65.77 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 431 | 65.77 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |
| 446 | 65.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 553 | 65.79 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 579 | 65.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 617 | 65.82 | temperature | 30.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 636 | 65.83 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 677 | 65.85 | temperature | 30.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 718 | 65.87 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 722 | 65.87 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 780 | 65.89 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 783 | 65.89 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 11 |
| 816 | 65.90 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 847 | 65.91 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 848 | 65.91 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 968 | 65.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 969 | 65.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 7 |
| 990 | 65.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 7 |