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Os02g0298100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.9 (0.0294) R2 : 0.837
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.13 (0.0724) R2dC : 0.677 R2C : 0.699
β3 : 1.43 (0.0849) R2dE : 0.105 R2E : 0.136
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.566 (0.0617) R2dN8 : 0.0379 R2N8 : 0.0193
σ : 0.55
deviance : 139.57
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_____
C
peak time of C : 21.4
E
wheather : radiation
threshold : 4.299
memory length : 13
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 21.8
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
133.6 0.543 9.89 0.468 3.15 1.51 -0.27 -0.369 0.608 21.4 3.659 20 21.6 --
133.59 0.538 9.89 0.479 3.13 1.49 -0.293 -- 0.609 21.4 3.789 16 21.8 --
133.59 0.538 9.89 0.476 3.14 1.5 -- -0.388 0.606 21.3 3.79 16 21.8 --
133.89 0.539 9.89 0.478 3.14 1.5 -- -- 0.607 21.3 3.9 16 21.8 --
211.08 0.68 9.81 0.485 -- 2.95 -- -0.322 0.582 -- 23.84 2 7.47 --
180.74 0.63 9.9 0.458 3.26 -- -0.308 -- 0.547 22.4 -- -- -- --
181.12 0.63 9.9 0.47 3.26 -- -- -- 0.548 22.4 -- -- -- --
181.91 0.631 9.81 0.473 -- 3.23 -- -- 0.555 -- 354.5 2 7.61 --
139.57 0.55 9.9 -- 3.13 1.43 -- -- 0.566 21.4 4.299 13 21.8 --
831.15 1.35 9.81 0.525 -- -- -- -- 0.56 -- -- -- -- --
186.95 0.64 9.91 -- 3.26 -- -- -- 0.495 22.4 -- -- -- --
187.03 0.637 9.83 -- -- 3.24 -- -- 0.496 -- 3390 11 7.65 --
838.42 1.35 9.83 -- -- -- -- -- 0.502 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 135.70 radiation 1.0 30 < th dose independent sin 4 NA
2 135.89 radiation 1.0 30 > th dose independent sin 4 NA
5 136.93 radiation 1.0 30 < th dose dependent sin 3 NA
11 139.22 radiation 1.0 90 < th dose independent rect. 23 18
15 139.62 radiation 1.0 90 < th dose dependent rect. 23 20
23 140.62 radiation 1.0 90 < th dose dependent rect. 23 18
25 140.80 radiation 1.0 90 < th dose independent rect. 23 20
47 142.13 radiation 1.0 270 < th dose dependent rect. 21 22
65 143.20 radiation 1.0 90 < th dose independent rect. 23 9
75 143.47 radiation 1.0 30 < th dose independent rect. 2 15
83 143.80 temperature 15.0 270 > th dose independent rect. 4 18
94 144.20 radiation 1.0 90 < th dose dependent rect. 23 9
114 145.11 radiation 1.0 30 < th dose dependent rect. 2 15
118 145.22 precipitation 0.1 270 < th dose independent rect. 4 18
119 145.22 precipitation 0.1 270 < th dose dependent rect. 4 18
120 145.26 precipitation 0.1 270 < th dose independent rect. 3 20
121 145.26 precipitation 0.1 270 < th dose dependent rect. 3 20
123 145.35 radiation 1.0 270 < th dose independent rect. 21 21
127 145.50 radiation 1.0 30 > th dose independent rect. 5 8
145 145.77 radiation 1.0 30 < th dose independent rect. 2 12
152 145.85 radiation 10.0 10 < th dose dependent rect. 24 16
158 146.04 temperature 20.0 30 > th dose independent rect. 5 8
183 146.63 temperature 15.0 270 > th dose independent rect. 3 8
216 146.97 radiation 1.0 30 < th dose independent rect. 2 10
223 147.07 radiation 1.0 30 < th dose independent rect. 2 6
228 147.12 temperature 10.0 270 > th dose dependent rect. 22 6
231 147.16 humidity 70.0 10 > th dose dependent rect. 23 21
245 147.21 radiation 1.0 30 < th dose dependent rect. 2 12
252 147.28 temperature 10.0 270 > th dose dependent rect. 23 4
255 147.32 temperature 30.0 270 < th dose independent rect. 4 6
260 147.38 wind 7.0 270 < th dose independent rect. 22 6
271 147.53 temperature 30.0 270 < th dose independent rect. 3 8
282 147.68 temperature 10.0 270 > th dose independent rect. 22 6
283 147.68 temperature 30.0 270 < th dose independent rect. 22 6
284 147.68 humidity 50.0 270 > th dose independent rect. 22 6
287 147.68 atmosphere 995.0 270 > th dose independent rect. 22 6
288 147.68 radiation 1.0 270 < th dose independent rect. 22 6
309 147.75 precipitation 0.1 270 < th dose independent rect. 3 8
310 147.75 precipitation 0.1 270 < th dose dependent rect. 3 8
326 148.07 wind 9.0 270 < th dose dependent rect. 22 6
339 148.32 atmosphere 995.0 270 > th dose dependent rect. 23 5
340 148.32 humidity 70.0 30 > th dose dependent rect. 11 18
349 148.46 radiation 1.0 30 < th dose dependent rect. 2 10
356 148.53 wind 9.0 270 < th dose dependent rect. 23 4
358 148.56 radiation 1.0 30 < th dose dependent rect. 2 6
369 148.63 humidity 80.0 270 > th dose independent rect. 23 4
370 148.64 radiation 10.0 10 < th dose dependent rect. 24 9
371 148.69 wind 5.0 270 < th dose independent rect. 23 4
376 148.75 wind 9.0 270 < th dose independent rect. 10 18
377 148.76 temperature 10.0 270 > th dose independent rect. 23 4
378 148.76 temperature 30.0 270 < th dose independent rect. 23 4
379 148.76 humidity 50.0 270 > th dose independent rect. 23 4
382 148.76 atmosphere 995.0 270 > th dose independent rect. 23 4
383 148.76 radiation 1.0 270 < th dose independent rect. 23 4
390 148.76 radiation 1.0 270 < th dose dependent rect. 23 4
401 148.80 temperature 15.0 270 > th dose independent rect. 4 6
404 148.83 atmosphere 1015.0 270 < th dose independent rect. 22 6
405 148.83 wind 9.0 270 < th dose independent rect. 11 16
420 148.89 humidity 70.0 10 > th dose dependent rect. 24 16
430 148.98 precipitation 0.1 270 < th dose independent rect. 23 4
432 148.98 precipitation 0.1 270 < th dose dependent rect. 23 4
463 149.15 atmosphere 1015.0 270 < th dose independent rect. 23 4
487 149.20 precipitation 0.1 270 < th dose independent rect. 22 6
488 149.20 precipitation 0.1 270 < th dose dependent rect. 22 6
497 149.30 humidity 50.0 270 > th dose dependent rect. 22 6
500 149.32 radiation 1.0 10 < th dose independent rect. 2 4
510 149.38 temperature 15.0 10 > th dose dependent rect. 2 3
540 149.56 humidity 80.0 10 > th dose independent rect. 24 18
555 149.66 atmosphere 995.0 270 > th dose independent rect. 4 18
566 149.75 humidity 50.0 270 > th dose dependent rect. 23 4
581 149.82 temperature 20.0 10 > th dose independent rect. 2 3
585 149.83 wind 9.0 270 < th dose independent rect. 4 18
586 149.83 radiation 1.0 30 < th dose dependent rect. 2 4
593 149.89 atmosphere 1015.0 270 < th dose independent rect. 4 18
621 150.11 wind 9.0 270 < th dose independent rect. 4 6
630 150.16 atmosphere 995.0 270 > th dose independent rect. 4 6
631 150.16 atmosphere 1015.0 270 < th dose independent rect. 4 6
632 150.16 temperature 10.0 270 > th dose independent rect. 10 18
640 150.20 precipitation 0.1 270 < th dose independent rect. 17 16
641 150.20 precipitation 0.1 270 < th dose dependent rect. 17 16
646 150.23 humidity 50.0 270 > th dose independent rect. 4 6
651 150.28 precipitation 0.1 270 < th dose independent rect. 15 8
652 150.28 precipitation 0.1 270 < th dose dependent rect. 15 8
655 150.33 wind 9.0 270 < th dose independent rect. 23 16
660 150.36 wind 1.0 90 > th dose independent rect. 1 4
668 150.39 wind 9.0 270 < th dose independent rect. 3 8
676 150.42 atmosphere 995.0 270 > th dose independent rect. 3 8
677 150.42 atmosphere 1015.0 270 < th dose independent rect. 3 8
678 150.42 temperature 10.0 270 > th dose independent rect. 11 16
721 150.75 humidity 50.0 30 > th dose dependent rect. 13 16
726 150.77 humidity 50.0 10 > th dose dependent rect. 11 18
735 150.82 humidity 50.0 270 > th dose independent rect. 3 8
759 150.90 wind 9.0 270 < th dose dependent rect. 4 6
773 151.01 atmosphere 995.0 270 > th dose independent rect. 3 20
789 151.09 wind 9.0 270 < th dose independent rect. 3 20
804 151.16 humidity 50.0 270 > th dose independent rect. 23 17
807 151.18 temperature 10.0 270 > th dose independent rect. 15 8
808 151.18 temperature 10.0 270 > th dose independent rect. 23 16
825 151.26 radiation 40.0 270 < th dose independent rect. 15 8
828 151.28 wind 9.0 10 < th dose independent rect. 13 16
832 151.33 atmosphere 1015.0 270 < th dose independent rect. 23 16
868 151.48 atmosphere 995.0 10 > th dose dependent rect. 2 3
873 151.51 atmosphere 995.0 270 > th dose independent rect. 23 16
909 151.72 wind 9.0 10 < th dose independent rect. 5 8
929 151.80 humidity 80.0 30 > th dose dependent rect. 7 22
990 152.02 precipitation 0.1 10 < th dose independent rect. 5 21
992 152.02 precipitation 0.1 10 < th dose dependent rect. 5 21
996 152.05 radiation 40.0 270 < th dose independent rect. 4 6
1000 152.07 humidity 50.0 270 > th dose independent rect. 10 18