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Os02g0294600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to WD-repeat protein-like.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0115) R2 : 0.0194
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0729 (0.0243) R2dN8 : 0.025 R2N8 : 0.0194
σ : 0.217
deviance : 21.66
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.34 0.178 13 0.286 0.168 -0.397 -0.165 -0.4 0.125 18.9 16.6 123 -- --
14.59 0.178 13 0.283 0.169 -0.376 -0.143 -- 0.124 18.6 13.69 122 -- --
14.41 0.177 13 0.289 0.167 -0.403 -- -0.385 0.125 18.8 16.92 122 -- --
14.63 0.178 13 0.284 0.166 -0.369 -- -- 0.123 18.9 14.87 122 -- --
15.83 0.185 13 0.29 -- -0.41 -- -0.374 0.122 -- 17.19 95 -- --
16.65 0.191 13 0.283 0.217 -- -0.0418 -- 0.105 21.8 -- -- -- --
16.66 0.191 13 0.285 0.217 -- -- -- 0.105 21.8 -- -- -- --
15.67 0.185 13 0.29 -- -0.36 -- -- 0.0995 -- 8.29 70 -- --
16.74 0.191 13 -- 0.159 -0.393 -- -- 0.0947 18.8 17.05 122 -- --
19.49 0.206 13 0.287 -- -- -- -- 0.105 -- -- -- -- --
18.8 0.203 13.1 -- 0.218 -- -- -- 0.0731 21.9 -- -- -- --
17.87 0.198 13 -- -- -0.357 -- -- 0.0674 -- 7.52 70 -- --
21.66 0.217 13 -- -- -- -- -- 0.0729 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.00 temperature 10.0 270 > th dose dependent rect. 21 16
4 13.23 temperature 10.0 270 > th dose dependent rect. 7 7
6 13.23 temperature 10.0 270 > th dose dependent rect. 19 19
18 13.40 temperature 15.0 270 > th dose independent rect. 19 8
19 13.44 atmosphere 1000.0 90 > th dose independent rect. 4 15
20 13.45 atmosphere 1000.0 10 > th dose independent rect. 5 15
24 13.50 temperature 15.0 270 > th dose independent rect. 8 18
32 13.53 temperature 10.0 10 > th dose dependent rect. 8 21
38 13.59 atmosphere 1000.0 10 > th dose independent rect. 5 18
43 13.60 temperature 10.0 90 > th dose dependent rect. 8 20
47 13.62 temperature 15.0 10 > th dose dependent rect. 8 8
48 13.63 temperature 10.0 43200 > th dose independent rect. 10 7
51 13.65 temperature 15.0 270 > th dose independent rect. 7 20
59 13.68 temperature 10.0 270 > th dose dependent rect. 8 18
80 13.74 radiation 30.0 90 < th dose independent rect. 4 15
86 13.75 temperature 15.0 270 > th dose independent rect. 21 16
92 13.76 radiation 40.0 10 < th dose independent rect. 5 15
97 13.76 radiation 40.0 270 < th dose dependent rect. 2 9
100 13.77 radiation 40.0 10 < th dose independent rect. 5 18
105 13.78 temperature 10.0 270 > th dose dependent rect. 19 8
106 13.78 temperature 15.0 10 > th dose dependent rect. 23 17
107 13.78 wind 9.0 14400 > th dose dependent rect. 18 20
109 13.79 wind 9.0 14400 > th dose dependent sin 7 NA
121 13.81 radiation 40.0 10 < th dose dependent rect. 5 18
129 13.82 radiation 40.0 10 < th dose dependent rect. 5 15
140 13.84 radiation 1.0 270 > th dose dependent rect. 8 5
166 13.89 temperature 15.0 10 > th dose independent rect. 20 9
170 13.89 radiation 40.0 270 < th dose dependent rect. 3 15
178 13.91 wind 9.0 14400 > th dose independent sin 7 NA
179 13.91 humidity 50.0 270 > th dose independent rect. 8 6
180 13.91 radiation 30.0 90 < th dose independent rect. 4 7
181 13.91 radiation 20.0 270 < th dose independent rect. 2 8
201 13.94 radiation 30.0 90 < th dose independent rect. 4 19
208 13.95 wind 9.0 14400 < th dose independent sin 7 NA
211 13.95 wind 9.0 14400 > th dose independent rect. 18 20
238 13.98 temperature 15.0 10 > th dose dependent rect. 20 20
240 13.99 wind 9.0 270 < th dose independent rect. 8 6
245 13.99 wind 1.0 43200 < th dose dependent rect. 9 2
264 14.01 humidity 50.0 270 > th dose independent rect. 22 15
281 14.03 temperature 30.0 90 < th dose independent rect. 4 7
290 14.04 temperature 15.0 10 > th dose independent rect. 23 6
293 14.04 wind 9.0 270 < th dose independent rect. 8 18
302 14.05 temperature 15.0 270 > th dose independent rect. 8 6
314 14.06 precipitation 0.1 270 < th dose independent rect. 8 6
318 14.06 atmosphere 995.0 270 > th dose independent rect. 14 18
320 14.06 wind 9.0 14400 < th dose independent rect. 18 20
321 14.06 radiation 30.0 90 < th dose independent rect. 15 20
323 14.06 precipitation 0.1 270 < th dose dependent rect. 8 6
344 14.07 precipitation 0.1 270 < th dose independent rect. 2 6
350 14.07 precipitation 0.1 270 < th dose independent rect. 14 18
352 14.07 precipitation 0.1 270 < th dose dependent rect. 2 6
355 14.07 precipitation 0.1 270 < th dose dependent rect. 14 18
360 14.08 atmosphere 995.0 270 > th dose independent rect. 8 6
361 14.08 atmosphere 1015.0 270 < th dose independent rect. 8 6
362 14.08 radiation 10.0 270 > th dose independent rect. 8 6
364 14.08 radiation 40.0 270 < th dose independent rect. 14 17
365 14.08 temperature 10.0 270 > th dose independent rect. 14 18
373 14.09 radiation 20.0 270 > th dose independent rect. 9 4
380 14.09 precipitation 0.1 270 < th dose independent rect. 3 16
381 14.09 wind 9.0 270 < th dose independent rect. 14 18
382 14.09 temperature 15.0 10 > th dose independent rect. 8 21
391 14.09 precipitation 0.1 270 < th dose dependent rect. 3 16
397 14.10 wind 1.0 270 > th dose independent rect. 8 6
398 14.10 wind 7.0 270 < th dose independent rect. 2 6
403 14.10 temperature 30.0 270 < th dose independent rect. 2 7
406 14.10 wind 9.0 270 < th dose independent rect. 22 15
425 14.11 temperature 10.0 270 > th dose independent rect. 2 6
428 14.11 humidity 50.0 270 > th dose independent rect. 2 6
430 14.11 atmosphere 995.0 270 > th dose independent rect. 2 6
431 14.11 atmosphere 1015.0 270 < th dose independent rect. 2 6
437 14.11 temperature 30.0 270 < th dose independent rect. 19 8
438 14.11 humidity 50.0 270 > th dose independent rect. 19 8
439 14.11 atmosphere 995.0 270 > th dose independent rect. 19 8
440 14.11 radiation 1.0 270 < th dose independent rect. 19 8
448 14.11 temperature 10.0 270 > th dose independent rect. 3 16
449 14.11 atmosphere 1015.0 270 < th dose independent rect. 3 16
458 14.11 temperature 30.0 270 < th dose dependent rect. 2 7
460 14.11 radiation 1.0 270 < th dose dependent rect. 19 8
472 14.12 wind 1.0 43200 < th dose independent rect. 10 1
474 14.12 wind 9.0 270 < th dose independent rect. 19 8
482 14.12 humidity 50.0 270 > th dose independent rect. 8 18
498 14.13 precipitation 0.1 270 < th dose independent rect. 19 8
511 14.13 precipitation 0.1 270 < th dose dependent rect. 19 8
529 14.14 precipitation 0.1 270 < th dose independent rect. 8 18
533 14.14 radiation 1.0 10 > th dose dependent rect. 8 8
540 14.14 precipitation 0.1 270 < th dose dependent rect. 8 18
544 14.15 wind 9.0 14400 < th dose independent rect. 21 17
546 14.15 wind 9.0 14400 > th dose independent rect. 18 22
550 14.15 radiation 1.0 10 > th dose dependent rect. 8 10
576 14.16 temperature 30.0 90 < th dose independent rect. 4 15
578 14.16 temperature 15.0 90 > th dose independent rect. 11 17
582 14.16 wind 9.0 270 < th dose independent rect. 7 20
585 14.16 temperature 30.0 90 < th dose dependent rect. 4 7
587 14.16 atmosphere 995.0 90 > th dose dependent rect. 4 15
598 14.17 temperature 30.0 270 < th dose dependent rect. 3 5
606 14.17 wind 9.0 14400 > th dose dependent rect. 21 23
607 14.18 wind 1.0 43200 > th dose independent rect. 10 1
622 14.18 radiation 1.0 10 < th dose dependent sin 10 NA
632 14.18 atmosphere 995.0 10 > th dose dependent rect. 5 15
638 14.19 wind 3.0 14400 > th dose independent rect. 2 1
639 14.19 precipitation 0.1 270 < th dose independent rect. 3 4
648 14.19 precipitation 0.1 270 < th dose dependent rect. 3 4
656 14.19 temperature 10.0 10 > th dose dependent rect. 20 9
662 14.19 wind 9.0 14400 > th dose dependent rect. 15 23
663 14.20 temperature 10.0 270 > th dose independent rect. 13 9
666 14.20 atmosphere 995.0 270 > th dose independent rect. 22 15
671 14.20 radiation 1.0 90 < th dose dependent sin 11 NA
694 14.21 radiation 40.0 10 < th dose dependent sin 20 NA
697 14.21 atmosphere 995.0 270 > th dose dependent rect. 2 6
720 14.22 wind 7.0 270 < th dose independent rect. 3 4
722 14.22 temperature 10.0 270 > th dose independent rect. 3 4
724 14.22 temperature 30.0 270 < th dose independent rect. 3 4
725 14.22 humidity 50.0 270 > th dose independent rect. 3 4
728 14.22 atmosphere 1015.0 270 < th dose independent rect. 3 4
729 14.22 radiation 40.0 270 < th dose independent rect. 3 4
731 14.22 humidity 90.0 270 < th dose independent rect. 8 6
750 14.22 wind 9.0 14400 < th dose independent rect. 18 22
753 14.22 wind 3.0 14400 > th dose dependent rect. 1 6
783 14.23 atmosphere 1000.0 90 > th dose independent rect. 4 7
789 14.23 wind 1.0 270 > th dose independent rect. 14 18
798 14.23 wind 9.0 270 < th dose dependent rect. 8 6
868 14.25 precipitation 0.1 270 < th dose independent rect. 22 15
876 14.25 radiation 1.0 10 > th dose dependent sin 20 NA
877 14.25 wind 9.0 270 < th dose dependent rect. 3 4
879 14.25 temperature 10.0 10 > th dose dependent rect. 23 6
884 14.25 precipitation 0.1 270 < th dose dependent rect. 22 15
896 14.26 precipitation 0.1 270 < th dose independent rect. 13 9
906 14.26 atmosphere 1015.0 10 < th dose dependent rect. 8 8
907 14.26 precipitation 0.1 270 < th dose dependent rect. 13 9
923 14.27 wind 1.0 270 > th dose independent rect. 2 6
929 14.27 wind 9.0 270 < th dose independent rect. 13 9
939 14.27 wind 9.0 270 < th dose independent rect. 3 16
949 14.27 precipitation 0.1 270 < th dose independent rect. 7 20
951 14.27 wind 9.0 14400 < th dose independent rect. 22 22
952 14.27 wind 9.0 14400 > th dose independent rect. 15 23
953 14.27 wind 9.0 14400 > th dose independent rect. 21 23
959 14.27 atmosphere 995.0 270 > th dose dependent rect. 13 8
969 14.27 precipitation 0.1 270 < th dose dependent rect. 7 20