Os02g0294000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Micro-fibrillar-associated 1, C-terminal family protein.
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Os02g0294000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Micro-fibrillar-associated 1, C-terminal family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.24 | 0.662 | 4.33 | 0.105 | 0.0677 | -0.352 | 0.687 | -0.406 | -0.259 | 6.82 | 25.06 | 27 | -- | -- |
| 198.82 | 0.657 | 4.32 | 0.217 | 0.0966 | -0.341 | 0.741 | -- | -0.237 | 5.73 | 25.04 | 26 | -- | -- |
| 198.89 | 0.657 | 4.33 | 0.127 | 0.123 | -0.334 | -- | -0.422 | -0.248 | 3.64 | 24.7 | 31 | -- | -- |
| 199.94 | 0.659 | 4.32 | 0.22 | 0.126 | -0.335 | -- | -- | -0.239 | 3.77 | 25.07 | 25 | -- | -- |
| 199.51 | 0.658 | 4.33 | 0.105 | -- | -0.368 | -- | -0.515 | -0.263 | -- | 24.71 | 30 | -- | -- |
| 205.9 | 0.673 | 4.36 | 0.143 | 0.35 | -- | 0.601 | -- | -0.418 | 3.68 | -- | -- | -- | -- |
| 206.86 | 0.674 | 4.36 | 0.133 | 0.352 | -- | -- | -- | -0.422 | 3.16 | -- | -- | -- | -- |
| 200.56 | 0.66 | 4.32 | 0.236 | -- | -0.388 | -- | -- | -0.208 | -- | 25.1 | 25 | -- | -- |
| 201.18 | 0.661 | 4.33 | -- | 0.144 | -0.314 | -- | -- | -0.269 | 3.89 | 25.1 | 25 | -- | -- |
| 213.91 | 0.683 | 4.36 | 0.148 | -- | -- | -- | -- | -0.413 | -- | -- | -- | -- | -- |
| 207.32 | 0.674 | 4.37 | -- | 0.355 | -- | -- | -- | -0.437 | 3.16 | -- | -- | -- | -- |
| 202.01 | 0.662 | 4.32 | -- | -- | -0.372 | -- | -- | -0.242 | -- | 25.03 | 25 | -- | -- |
| 214.49 | 0.684 | 4.37 | -- | -- | -- | -- | -- | -0.429 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 194.32 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 2 | 194.57 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 11 | 194.79 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 12 | 194.79 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 16 | 194.84 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 22 | 194.96 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 23 | 194.96 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 24 | 10 |
| 25 | 194.97 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 27 | 194.98 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 82 | 195.21 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 9 |
| 113 | 195.45 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 124 | 195.50 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 136 | 195.56 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 17 |
| 157 | 195.68 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 193 | 195.90 | temperature | 25.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 249 | 196.27 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 20 | 12 |
| 270 | 196.43 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 22 |
| 273 | 196.44 | atmosphere | 1000.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 279 | 196.45 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 282 | 196.47 | wind | 5.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 294 | 196.53 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 299 | 196.55 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 314 | 196.60 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 323 | 196.65 | wind | 5.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 328 | 196.70 | atmosphere | 1000.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 336 | 196.74 | temperature | 10.0 | 30 | > th | dose dependent | sin | 4 | NA |
| 355 | 196.82 | wind | 7.0 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 359 | 196.82 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 381 | 196.92 | wind | 7.0 | 1440 | < th | dose independent | rect. | 20 | 13 |
| 384 | 196.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 9 |
| 389 | 196.96 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 390 | 196.97 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 411 | 197.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 412 | 197.04 | temperature | 25.0 | 30 | > th | dose independent | rect. | 3 | 9 |
| 430 | 197.15 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 1 | 15 |
| 431 | 197.15 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 444 | 197.20 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 445 | 197.20 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 447 | 197.20 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 454 | 197.21 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 21 |
| 463 | 197.25 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 466 | 197.26 | wind | 7.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 487 | 197.33 | atmosphere | 1000.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 493 | 197.35 | wind | 7.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 498 | 197.36 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 502 | 197.37 | wind | 7.0 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 508 | 197.39 | wind | 9.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 514 | 197.39 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 519 | 197.40 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 524 | 197.42 | atmosphere | 1000.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 526 | 197.43 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 536 | 197.45 | wind | 9.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 561 | 197.53 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 563 | 197.53 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 570 | 197.54 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 615 | 197.68 | temperature | 30.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 642 | 197.74 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 645 | 197.75 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 685 | 197.83 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 701 | 197.86 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 706 | 197.87 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 728 | 197.90 | wind | 9.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 735 | 197.91 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 752 | 197.92 | temperature | 25.0 | 30 | > th | dose independent | rect. | 23 | 13 |
| 760 | 197.93 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 765 | 197.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 777 | 197.96 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 779 | 197.96 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 785 | 197.98 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 805 | 198.01 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 811 | 198.02 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 826 | 198.05 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 827 | 198.05 | temperature | 25.0 | 30 | > th | dose independent | rect. | 15 | 21 |
| 843 | 198.08 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 21 |
| 860 | 198.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 876 | 198.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 877 | 198.12 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 881 | 198.12 | temperature | 25.0 | 30 | < th | dose independent | rect. | 18 | 23 |
| 899 | 198.14 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 920 | 198.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 934 | 198.17 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 942 | 198.18 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 946 | 198.18 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 947 | 198.18 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 950 | 198.19 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 975 | 198.23 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 991 | 198.25 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 992 | 198.25 | wind | 9.0 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 996 | 198.25 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 17 | 1 |