Os02g0291600 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0291600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	2.89	(0.0382)	R²	:	0.118
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	5.63	(0.722)	R²_dE	:	0.117	R²_E	:	0.118
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.0244	(0.0804)	R²_dN8	:	0.00023	R²_N8	:	0.000409
σ	:	0.72
deviance	:	237.36
__

_____

C
peak time of C	:	--
E
wheather	:	humidity
threshold	:	78.63
memory length	:	8
response mode	:	< th
dose dependency	:	dose independent
G
type of G	:	rect.
peak or start time of G	:	4.34
open length of G	:	2.42

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
233.77	0.712	2.88	0.196	0.0888	2.9	0.885	12	-0.00791	15.9	80	10	5	1
233.83	0.718	2.88	0.172	0.0907	5.71	0.866	--	-0.00659	15.9	80	10	5	1
235.98	0.715	2.88	0.209	0.098	2.81	--	12.1	-0.0021	16.6	79.5	42	5.06	2.01
235.99	0.72	2.88	0.184	0.0987	5.63	--	--	-0.00182	16.7	80	10	5	1
236.49	0.716	2.87	0.209	--	2.38	--	13.7	-0.00509	--	79.02	34	4.95	2.03
266.03	0.765	2.89	0.213	0.0492	--	0.652	--	-0.0177	15	--	--	--	--
267.45	0.766	2.88	0.227	0.0525	--	--	--	-0.0138	15.4	--	--	--	--
236.5	0.719	2.88	0.18	--	5.59	--	--	-0.00449	--	78.67	6	4.09	2.15
236.88	0.721	2.89	--	0.0956	5.67	--	--	-0.0222	16.7	80	10	5	1
267.61	0.764	2.88	0.225	--	--	--	--	-0.0152	--	--	--	--	--
268.81	0.767	2.89	--	0.048	--	--	--	-0.0391	15.4	--	--	--	--
237.36	0.72	2.89	--	--	5.63	--	--	-0.0244	--	78.63	8	4.34	2.42
268.94	0.765	2.89	--	--	--	--	--	-0.0402	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	233.77	humidity	80.0	10	< th	dose independent	rect.	5	1
6	233.77	humidity	80.0	10	< th	dose dependent	rect.	5	1
28	238.18	wind	3.0	10	> th	dose dependent	rect.	6	1
33	241.11	wind	3.0	10	> th	dose independent	rect.	5	2
37	242.27	wind	1.0	10	< th	dose independent	rect.	21	1
41	242.27	wind	1.0	10	< th	dose dependent	rect.	21	1
48	242.36	wind	1.0	90	< th	dose dependent	rect.	21	1
70	242.94	wind	1.0	10	< th	dose dependent	rect.	14	8
94	243.53	wind	1.0	90	< th	dose dependent	rect.	24	1
112	244.47	wind	1.0	10	< th	dose independent	rect.	14	8
127	245.84	atmosphere	1000.0	10	< th	dose dependent	rect.	14	1
129	245.85	atmosphere	1000.0	90	< th	dose independent	rect.	13	1
140	245.90	wind	1.0	10	< th	dose independent	rect.	13	1
142	245.90	wind	1.0	10	< th	dose dependent	rect.	13	1
169	247.06	wind	1.0	90	< th	dose independent	rect.	24	1
179	247.48	wind	1.0	270	< th	dose independent	rect.	18	1
180	247.48	wind	1.0	270	< th	dose dependent	rect.	18	1
183	247.83	humidity	80.0	270	< th	dose dependent	rect.	2	4
189	248.36	radiation	40.0	10	> th	dose dependent	rect.	14	1
229	248.48	wind	1.0	10	< th	dose independent	rect.	11	11
245	249.75	temperature	25.0	90	< th	dose dependent	rect.	4	19
247	249.78	temperature	25.0	90	< th	dose dependent	rect.	16	1
254	250.08	temperature	25.0	10	< th	dose dependent	rect.	5	18
255	250.10	wind	1.0	90	< th	dose dependent	rect.	11	11
295	251.20	atmosphere	1005.0	90	> th	dose dependent	rect.	16	7
333	252.26	radiation	40.0	10	> th	dose dependent	rect.	12	3
353	252.30	temperature	10.0	90	> th	dose dependent	rect.	13	23
358	252.38	wind	7.0	30	> th	dose independent	rect.	17	1
375	252.73	radiation	40.0	10	> th	dose independent	rect.	14	1
416	252.78	temperature	20.0	10	> th	dose dependent	rect.	14	22
424	253.01	wind	1.0	14400	< th	dose independent	rect.	21	1
426	253.09	wind	1.0	90	< th	dose independent	rect.	8	1
432	253.26	humidity	90.0	1440	< th	dose dependent	rect.	5	1
434	253.28	temperature	25.0	10	< th	dose dependent	rect.	17	6
439	253.39	temperature	25.0	90	< th	dose dependent	rect.	16	6
457	253.67	wind	1.0	14400	< th	dose dependent	rect.	20	2
461	253.70	temperature	25.0	10	< th	dose dependent	rect.	17	1
470	253.79	wind	7.0	1440	> th	dose independent	rect.	8	1
474	253.86	radiation	40.0	10	> th	dose dependent	sin	13	NA
489	253.95	temperature	30.0	90	< th	dose dependent	rect.	16	21
490	253.96	wind	1.0	14400	> th	dose independent	rect.	21	1
492	254.00	atmosphere	1005.0	10	> th	dose dependent	rect.	20	2
498	254.15	atmosphere	1005.0	90	> th	dose dependent	rect.	19	3
506	254.22	atmosphere	1005.0	10	> th	dose dependent	rect.	17	1
509	254.24	temperature	30.0	10	< th	dose dependent	rect.	17	19
524	254.37	temperature	25.0	90	< th	dose dependent	rect.	8	14
531	254.41	wind	3.0	10	< th	dose dependent	rect.	7	16
536	254.46	atmosphere	1005.0	10	< th	dose dependent	rect.	24	2
538	254.48	wind	5.0	1440	< th	dose independent	rect.	8	1
556	254.57	temperature	10.0	90	> th	dose dependent	rect.	22	23
559	254.59	temperature	25.0	10	< th	dose dependent	rect.	8	15
566	254.62	wind	7.0	1440	> th	dose independent	rect.	1	8
569	254.63	temperature	30.0	90	< th	dose dependent	rect.	19	16
571	254.64	wind	5.0	1440	> th	dose dependent	rect.	8	1
581	254.67	wind	7.0	1440	< th	dose independent	rect.	1	8
615	254.79	wind	5.0	4320	> th	dose dependent	rect.	20	7
645	255.00	wind	1.0	90	< th	dose independent	rect.	11	11
656	255.03	temperature	10.0	30	> th	dose dependent	rect.	3	23
664	255.07	atmosphere	1000.0	10	< th	dose dependent	rect.	13	9
667	255.08	wind	5.0	1440	> th	dose dependent	rect.	1	8
698	255.14	atmosphere	1000.0	10	< th	dose dependent	rect.	13	7
705	255.16	wind	1.0	90	< th	dose dependent	rect.	8	1
714	255.19	precipitation	0.1	14400	> th	dose dependent	rect.	21	1
718	255.21	precipitation	0.1	14400	> th	dose independent	rect.	20	2
729	255.25	precipitation	0.1	14400	< th	dose independent	rect.	20	2
730	255.25	precipitation	0.1	14400	< th	dose dependent	rect.	20	2
749	255.33	temperature	25.0	90	< th	dose dependent	sin	22	NA
754	255.34	wind	7.0	30	> th	dose dependent	rect.	17	1
757	255.35	wind	5.0	4320	> th	dose independent	rect.	20	1
768	255.38	temperature	30.0	90	< th	dose dependent	rect.	19	18
772	255.40	humidity	90.0	270	< th	dose independent	rect.	17	4
778	255.42	precipitation	0.1	14400	> th	dose dependent	rect.	20	3
783	255.44	temperature	10.0	270	> th	dose dependent	rect.	22	11
791	255.46	atmosphere	995.0	14400	> th	dose independent	rect.	18	1
792	255.46	atmosphere	1000.0	270	< th	dose dependent	rect.	10	1
800	255.48	wind	5.0	4320	< th	dose independent	rect.	20	1
804	255.48	temperature	30.0	10	< th	dose dependent	rect.	17	17
827	255.57	humidity	90.0	270	< th	dose independent	rect.	17	13
833	255.58	wind	5.0	1440	> th	dose dependent	rect.	24	10
858	255.66	humidity	90.0	90	< th	dose independent	rect.	20	1
859	255.66	wind	5.0	1440	> th	dose dependent	rect.	20	14
871	255.72	temperature	10.0	10	> th	dose dependent	rect.	22	23
872	255.73	temperature	25.0	90	< th	dose dependent	rect.	11	11
876	255.75	wind	7.0	1440	< th	dose independent	rect.	4	5
878	255.75	precipitation	0.1	14400	> th	dose dependent	rect.	20	6
879	255.75	wind	5.0	1440	> th	dose dependent	rect.	22	12
881	255.77	temperature	30.0	90	< th	dose dependent	rect.	19	14
882	255.78	radiation	20.0	1440	> th	dose independent	rect.	6	1
912	255.82	temperature	10.0	270	> th	dose dependent	rect.	19	23
929	255.86	wind	7.0	4320	> th	dose independent	rect.	20	8
930	255.86	wind	7.0	4320	< th	dose independent	rect.	20	8
969	255.96	temperature	10.0	90	> th	dose dependent	no	NA	NA