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Os02g0290000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein prenyltransferase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.83 (0.0175) R2 : 0.12
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.29 (0.0368) R2dN8 : 0.155 R2N8 : 0.12
σ : 0.329
deviance : 49.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.89 0.23 9.82 -0.445 0.0289 -0.753 0.514 -0.223 0.338 2.01 21.91 19 -- --
23.87 0.228 9.82 -0.411 0.0218 -0.769 0.56 -- 0.342 1.87 22.42 16 -- --
24.51 0.231 9.83 -0.548 0.0249 -0.734 -- -0.833 0.304 3.88 22.5 16 -- --
25.03 0.233 9.82 -0.423 0.0212 -0.797 -- -- 0.345 4.9 22.57 17 -- --
24.54 0.231 9.83 -0.547 -- -0.756 -- -0.823 0.309 -- 22.55 17 -- --
32.87 0.269 9.84 -0.563 0.325 -- 0.787 -- 0.223 2.74 -- -- -- --
35.01 0.277 9.84 -0.582 0.329 -- -- -- 0.219 2.9 -- -- -- --
25.04 0.233 9.82 -0.42 -- -0.811 -- -- 0.347 -- 22.6 17 -- --
29.45 0.253 9.8 -- 0.0265 -0.919 -- -- 0.411 16.4 22.2 17 -- --
41.26 0.3 9.84 -0.568 -- -- -- -- 0.227 -- -- -- -- --
43.94 0.31 9.83 -- 0.318 -- -- -- 0.283 2.88 -- -- -- --
29.48 0.253 9.8 -- -- -0.894 -- -- 0.408 -- 22.2 17 -- --
49.77 0.329 9.83 -- -- -- -- -- 0.29 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.59 temperature 20 30 > th dose dependent rect. 19 23
2 23.65 temperature 10 10 > th dose dependent sin 0 NA
18 24.05 temperature 20 10 > th dose dependent rect. 6 23
35 24.31 temperature 20 10 > th dose dependent rect. 23 23
50 24.64 temperature 20 10 > th dose dependent rect. 6 15
51 24.65 temperature 20 10 > th dose dependent no NA NA
58 24.73 temperature 25 10 > th dose dependent rect. 15 23
61 24.75 temperature 20 10 > th dose dependent rect. 4 23
68 24.81 temperature 20 10 > th dose dependent rect. 2 23
84 24.93 temperature 30 10 < th dose dependent sin 0 NA
88 24.95 temperature 20 10 > th dose dependent rect. 6 12
91 24.97 temperature 20 10 > th dose dependent rect. 6 21
95 24.99 temperature 25 10 > th dose dependent rect. 4 21
103 25.01 temperature 25 10 > th dose dependent rect. 3 19
114 25.03 temperature 25 10 > th dose dependent rect. 6 19
119 25.03 temperature 25 10 > th dose dependent rect. 13 23
132 25.05 temperature 20 10 > th dose dependent rect. 24 18
189 25.18 temperature 20 10 > th dose dependent rect. 17 23
224 25.23 temperature 25 10 > th dose dependent rect. 11 23
249 25.29 temperature 20 10 > th dose dependent rect. 8 23
556 25.91 temperature 30 270 < th dose dependent rect. 1 18
575 25.97 temperature 30 270 < th dose dependent rect. 24 21
579 25.98 temperature 30 270 < th dose dependent rect. 3 16
614 26.03 temperature 30 30 < th dose dependent rect. 5 14
773 26.30 temperature 30 30 < th dose dependent rect. 7 12
794 26.33 temperature 30 10 < th dose dependent rect. 1 23
795 26.33 temperature 30 30 < th dose dependent rect. 7 23
806 26.36 temperature 30 90 < th dose dependent rect. 3 20
849 26.41 temperature 30 30 < th dose dependent rect. 3 23
873 26.46 temperature 30 270 < th dose independent rect. 3 14
895 26.49 temperature 30 270 < th dose independent rect. 3 16
917 26.51 temperature 30 30 < th dose dependent rect. 5 18
993 26.62 temperature 25 90 > th dose independent rect. 23 22