Os02g0284800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0284800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.11 | 0.513 | 9.82 | 0.192 | 2.43 | 2.61 | 0.962 | 1.52 | -0.115 | 17.9 | 18.6 | 40 | 21 | -- |
| 122.06 | 0.515 | 9.83 | 0.081 | 2.47 | 2.62 | 0.794 | -- | -0.144 | 17.8 | 18.51 | 40 | 21.1 | -- |
| 121.3 | 0.513 | 9.8 | 0.208 | 2.41 | 2.59 | -- | 1.58 | -0.0842 | 17.8 | 18.68 | 37 | 20.9 | -- |
| 123.63 | 0.518 | 9.83 | 0.0517 | 2.35 | 2.64 | -- | -- | -0.142 | 17.9 | 18.64 | 36 | 20.8 | -- |
| 163.4 | 0.595 | 9.77 | 0.0197 | -- | 3.23 | -- | 0.679 | -0.0773 | -- | 11.79 | 203 | 17 | -- |
| 183.07 | 0.634 | 9.73 | 0.405 | 2.45 | -- | 1.19 | -- | 0.122 | 15.4 | -- | -- | -- | -- |
| 187.51 | 0.641 | 9.73 | 0.426 | 2.46 | -- | -- | -- | 0.128 | 15.4 | -- | -- | -- | -- |
| 152.33 | 0.575 | 9.76 | 0.119 | -- | 3.2 | -- | -- | -0.0317 | -- | 9.173 | 32 | 15 | -- |
| 123.67 | 0.518 | 9.83 | -- | 2.38 | 2.68 | -- | -- | -0.153 | 17.9 | 18.6 | 35 | 20.8 | -- |
| 526.37 | 1.07 | 9.73 | 0.323 | -- | -- | -- | -- | 0.0635 | -- | -- | -- | -- | -- |
| 192.3 | 0.649 | 9.74 | -- | 2.45 | -- | -- | -- | 0.081 | 15.4 | -- | -- | -- | -- |
| 152.12 | 0.574 | 9.76 | -- | -- | 3.28 | -- | -- | -0.0488 | -- | 10.26 | 17 | 14.8 | -- |
| 529.11 | 1.07 | 9.74 | -- | -- | -- | -- | -- | 0.0277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 2 | 113.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 9 | 118.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 11 | 119.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 15 | 119.56 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 23 | 120.05 | temperature | 20 | 30 | > th | dose dependent | sin | 3 | NA |
| 36 | 121.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 79 | 122.68 | temperature | 30 | 30 | < th | dose dependent | sin | 2 | NA |
| 170 | 126.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 225 | 128.70 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 18 |
| 264 | 130.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 327 | 131.67 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 403 | 133.54 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 415 | 133.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 18 |
| 463 | 134.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 18 |
| 472 | 135.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 590 | 137.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 599 | 137.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 622 | 137.52 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 663 | 137.95 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 910 | 140.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 972 | 140.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |