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Os02g0282900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to 68 kDa protein HP68.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.73 (0.0244) R2 : 0.35
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.806 (0.0514) R2dN8 : 0.452 R2N8 : 0.35
σ : 0.46
deviance : 97.14
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.59 0.403 7.74 0.0467 0.599 -0.385 1.11 -0.587 0.745 3.61 21.2 22 -- --
74.75 0.403 7.74 -0.0894 0.578 -0.373 0.786 -- 0.699 3.74 21.56 93 -- --
75.99 0.406 7.75 -0.0675 0.597 -0.366 -- -0.154 0.712 3.72 21.5 36 -- --
76.11 0.406 7.75 -0.124 0.603 -0.366 -- -- 0.698 3.9 21.54 110 -- --
94.63 0.453 7.74 -0.0234 -- -0.213 -- -0.137 0.76 -- 21.6 105 -- --
81.38 0.423 7.73 -0.00387 0.513 -- 0.695 -- 0.798 4.3 -- -- -- --
82.71 0.426 7.73 -0.0103 0.518 -- -- -- 0.794 4.34 -- -- -- --
88.79 0.439 7.77 -0.151 -- -0.475 -- -- 0.649 -- 22.16 1260 -- --
76.49 0.407 7.75 -- 0.598 -0.347 -- -- 0.714 3.91 21.6 109 -- --
97.14 0.461 7.73 0.0102 -- -- -- -- 0.808 -- -- -- -- --
82.71 0.425 7.73 -- 0.518 -- -- -- 0.795 4.34 -- -- -- --
89.29 0.44 7.76 -- -- -0.429 -- -- 0.678 -- 22.23 1260 -- --
97.14 0.46 7.73 -- -- -- -- -- 0.806 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.62 humidity 90.0 4320 > th dose dependent rect. 8 1
2 71.85 precipitation 0.1 4320 < th dose independent rect. 7 1
3 71.85 precipitation 0.1 4320 < th dose dependent rect. 7 1
4 71.89 precipitation 0.1 4320 > th dose independent rect. 7 1
5 71.89 precipitation 0.1 4320 > th dose dependent rect. 7 1
6 72.52 wind 1.0 14400 > th dose dependent rect. 22 2
7 72.59 wind 1.0 14400 > th dose dependent rect. 22 4
8 72.59 wind 5.0 14400 < th dose dependent rect. 22 4
30 72.92 wind 3.0 14400 < th dose independent rect. 23 1
33 72.94 precipitation 0.1 14400 > th dose dependent rect. 5 3
47 73.07 precipitation 0.1 14400 > th dose independent rect. 5 3
48 73.08 humidity 80.0 4320 < th dose independent rect. 11 1
49 73.08 wind 3.0 14400 < th dose dependent rect. 1 1
54 73.12 wind 1.0 14400 > th dose dependent rect. 1 1
58 73.24 precipitation 0.1 14400 > th dose dependent rect. 4 10
59 73.28 precipitation 0.1 14400 > th dose dependent rect. 4 6
60 73.32 precipitation 0.1 14400 > th dose independent rect. 4 12
64 73.34 precipitation 0.1 14400 > th dose independent rect. 4 10
65 73.35 precipitation 0.1 14400 < th dose independent rect. 4 12
66 73.35 precipitation 0.1 14400 < th dose dependent rect. 4 12
68 73.37 wind 3.0 14400 > th dose independent rect. 23 1
71 73.38 wind 9.0 14400 < th dose dependent rect. 1 1
72 73.39 wind 3.0 14400 < th dose independent rect. 22 4
75 73.41 precipitation 0.1 14400 < th dose independent rect. 4 10
77 73.41 precipitation 0.1 14400 < th dose dependent rect. 4 10
79 73.42 wind 3.0 14400 < th dose dependent rect. 21 10
84 73.47 precipitation 0.1 14400 > th dose independent rect. 4 6
91 73.51 wind 3.0 14400 > th dose independent rect. 22 4
96 73.55 precipitation 0.1 14400 < th dose independent rect. 4 6
97 73.55 precipitation 0.1 14400 < th dose dependent rect. 4 6
131 73.72 humidity 80.0 4320 > th dose independent rect. 11 1
142 73.80 temperature 25.0 10 < th dose dependent rect. 11 21
167 73.90 wind 3.0 14400 < th dose independent rect. 6 1
169 73.90 temperature 25.0 10 < th dose dependent rect. 22 22
170 73.90 temperature 25.0 90 < th dose dependent rect. 23 22
171 73.90 temperature 25.0 10 < th dose dependent rect. 1 23
172 73.90 temperature 25.0 10 < th dose dependent rect. 18 23
182 73.92 wind 3.0 14400 < th dose dependent rect. 5 2
193 73.94 temperature 25.0 270 < th dose dependent rect. 9 21
197 73.95 temperature 25.0 90 < th dose dependent rect. 23 18
216 73.98 wind 1.0 14400 > th dose dependent rect. 22 9
230 74.01 temperature 25.0 90 < th dose dependent rect. 23 20
235 74.02 temperature 25.0 10 < th dose dependent no NA NA
242 74.04 radiation 1.0 1440 > th dose independent rect. 6 9
249 74.05 wind 3.0 14400 < th dose independent rect. 1 1
254 74.05 temperature 25.0 10 < th dose dependent rect. 3 23
269 74.07 temperature 25.0 10 < th dose dependent rect. 22 18
272 74.07 temperature 25.0 10 < th dose dependent rect. 15 23
273 74.08 precipitation 0.1 14400 > th dose independent rect. 17 1
275 74.08 radiation 1.0 1440 < th dose independent rect. 6 9
279 74.08 temperature 25.0 10 < th dose dependent rect. 5 23
283 74.09 temperature 25.0 10 < th dose dependent rect. 13 23
284 74.10 humidity 80.0 14400 > th dose dependent rect. 13 1
293 74.12 humidity 80.0 1440 < th dose independent rect. 4 8
295 74.12 wind 5.0 1440 < th dose dependent rect. 24 1
296 74.12 wind 1.0 14400 < th dose dependent rect. 2 6
306 74.14 temperature 25.0 10 < th dose dependent rect. 7 23
313 74.16 humidity 90.0 4320 > th dose independent rect. 13 1
329 74.18 atmosphere 1005.0 4320 < th dose independent rect. 23 2
342 74.20 wind 1.0 14400 > th dose independent rect. 21 10
343 74.20 temperature 25.0 10 < th dose dependent sin 6 NA
346 74.21 atmosphere 1005.0 4320 > th dose independent rect. 23 2
364 74.23 wind 1.0 14400 > th dose dependent rect. 5 1
384 74.26 wind 3.0 14400 > th dose independent rect. 5 2
405 74.28 temperature 25.0 1440 < th dose dependent rect. 18 1
410 74.29 precipitation 0.1 1440 > th dose independent rect. 22 2
412 74.29 precipitation 0.1 1440 > th dose dependent rect. 22 2
441 74.34 precipitation 0.1 14400 < th dose independent rect. 17 1
443 74.34 precipitation 0.1 14400 < th dose dependent rect. 17 1
446 74.34 humidity 90.0 4320 > th dose dependent rect. 7 7
462 74.36 wind 1.0 14400 > th dose independent rect. 21 8
494 74.40 wind 3.0 14400 > th dose independent rect. 5 4
500 74.41 wind 1.0 14400 < th dose independent rect. 20 12
501 74.41 temperature 25.0 1440 < th dose dependent rect. 17 3
550 74.46 temperature 25.0 1440 < th dose dependent rect. 16 5
551 74.46 wind 1.0 14400 < th dose dependent rect. 2 9
564 74.47 wind 3.0 14400 < th dose dependent sin 10 NA
565 74.47 wind 1.0 1440 > th dose dependent rect. 24 2
582 74.48 humidity 80.0 1440 > th dose independent rect. 4 9
611 74.50 humidity 80.0 1440 < th dose independent rect. 23 14
618 74.50 temperature 25.0 720 < th dose dependent rect. 9 16
654 74.53 precipitation 0.1 14400 > th dose dependent rect. 17 1
656 74.53 humidity 70.0 4320 > th dose dependent rect. 10 2
678 74.56 wind 5.0 14400 < th dose independent rect. 11 4
682 74.56 radiation 1.0 4320 < th dose dependent rect. 7 3
728 74.61 humidity 70.0 1440 > th dose dependent rect. 8 4
763 74.64 wind 3.0 14400 > th dose independent rect. 1 1
771 74.64 temperature 25.0 1440 < th dose dependent rect. 11 12
776 74.65 wind 5.0 14400 > th dose independent rect. 12 3
791 74.66 wind 1.0 14400 > th dose independent rect. 1 7
794 74.66 humidity 90.0 90 > th dose dependent sin 22 NA
862 74.71 temperature 25.0 720 < th dose dependent sin 17 NA
896 74.73 wind 1.0 14400 > th dose independent sin 9 NA
925 74.74 temperature 25.0 720 < th dose dependent rect. 5 19
928 74.75 wind 1.0 14400 < th dose independent rect. 1 7
989 74.79 humidity 90.0 4320 > th dose independent rect. 8 1
998 74.79 humidity 90.0 14400 < th dose dependent rect. 2 2