Os02g0280700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Iron/ascorbate-dependent oxidoreductase.
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Os02g0280700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Iron/ascorbate-dependent oxidoreductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.81 | 0.535 | 10.5 | -2.29 | 0.589 | 0.709 | 0.596 | -7.09 | -1.85 | 4.64 | 0.9999 | 4563 | -- | -- |
| 136.34 | 0.544 | 10.3 | -1.72 | 0.572 | -0.725 | 0.691 | -- | -1.77 | 4.42 | 1.999 | 19811 | -- | -- |
| 130.72 | 0.533 | 10.5 | -2.28 | 0.592 | 0.674 | -- | -6.92 | -1.85 | 4.51 | 0.9878 | 4548 | -- | -- |
| 135.12 | 0.541 | 10.4 | -1.76 | 0.564 | -0.884 | -- | -- | -1.87 | 4.56 | 2 | 18061 | -- | -- |
| 149.4 | 0.569 | 10.5 | -2.24 | -- | 0.613 | -- | -6.59 | -1.84 | -- | 0.9582 | 4563 | -- | -- |
| 159.23 | 0.592 | 10.3 | -2.17 | 0.567 | -- | 0.421 | -- | -1.79 | 4.76 | -- | -- | -- | -- |
| 159.67 | 0.592 | 10.3 | -2.17 | 0.569 | -- | -- | -- | -1.79 | 4.64 | -- | -- | -- | -- |
| 151.8 | 0.574 | 10.3 | -1.68 | -- | -0.907 | -- | -- | -1.86 | -- | 1.919 | 19842 | -- | -- |
| 197.34 | 0.654 | 10.3 | -- | 0.523 | -1.46 | -- | -- | -1.8 | 4.42 | 2.268 | 29817 | -- | -- |
| 176.91 | 0.621 | 10.3 | -2.15 | -- | -- | -- | -- | -1.78 | -- | -- | -- | -- | -- |
| 284.3 | 0.789 | 10.3 | -- | 0.529 | -- | -- | -- | -1.55 | 4.75 | -- | -- | -- | -- |
| 211.39 | 0.677 | 10.4 | -- | -- | -1.4 | -- | -- | -1.8 | -- | 2.268 | 32217 | -- | -- |
| 299.16 | 0.807 | 10.3 | -- | -- | -- | -- | -- | -1.54 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.54 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 3 | 112.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 5 | 112.36 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 9 | 112.69 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 15 | 113.06 | wind | 1 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 20 | 113.35 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 24 | 113.44 | wind | 1 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 43 | 113.88 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 79 | 114.61 | wind | 1 | 14400 | > th | dose independent | sin | 8 | NA |
| 98 | 114.86 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 112 | 115.11 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 114 | 115.12 | wind | 3 | 14400 | < th | dose dependent | sin | 10 | NA |
| 116 | 115.15 | wind | 1 | 14400 | < th | dose independent | sin | 9 | NA |
| 142 | 115.47 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 159 | 115.67 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 189 | 115.98 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 205 | 116.14 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 209 | 116.17 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 249 | 116.46 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 338 | 116.94 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 400 | 117.27 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 13 |
| 427 | 117.38 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 6 |
| 893 | 119.33 | wind | 1 | 14400 | > th | dose dependent | rect. | 19 | 14 |
| 929 | 119.46 | wind | 5 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 995 | 119.68 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 1 |