Os02g0275200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Xyloglucan fucosyltransferase family protein.
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Os02g0275200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Xyloglucan fucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.03 | 0.605 | 9.9 | 0.858 | 1.53 | -1.59 | -0.597 | 1.27 | -0.331 | 23 | 80.52 | 1311 | -- | -- |
| 167.92 | 0.604 | 9.92 | 0.759 | 1.58 | -1.52 | -0.486 | -- | -0.337 | 23 | 81.54 | 1270 | -- | -- |
| 167.49 | 0.603 | 9.9 | 0.874 | 1.53 | -1.59 | -- | 1.13 | -0.329 | 23 | 80.54 | 1309 | -- | -- |
| 168.95 | 0.605 | 9.91 | 0.763 | 1.58 | -1.52 | -- | -- | -0.339 | 23 | 81.47 | 1270 | -- | -- |
| 273.09 | 0.774 | 9.88 | 0.588 | -- | -1.62 | -- | 1.08 | -0.358 | -- | 84 | 1535 | -- | -- |
| 219.44 | 0.694 | 9.9 | 0.491 | 1.39 | -- | -0.7 | -- | -0.295 | 22.6 | -- | -- | -- | -- |
| 221.45 | 0.697 | 9.9 | 0.52 | 1.39 | -- | -- | -- | -0.292 | 22.6 | -- | -- | -- | -- |
| 275.03 | 0.776 | 9.88 | 0.58 | -- | -1.57 | -- | -- | -0.351 | -- | 85 | 1538 | -- | -- |
| 183.17 | 0.63 | 9.9 | -- | 1.59 | -1.5 | -- | -- | -0.306 | 23 | 106.6 | 1267 | -- | -- |
| 341.12 | 0.863 | 9.86 | 0.546 | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
| 228.58 | 0.707 | 9.91 | -- | 1.4 | -- | -- | -- | -0.35 | 22.6 | -- | -- | -- | -- |
| 282.65 | 0.783 | 9.87 | -- | -- | -1.59 | -- | -- | -0.334 | -- | 202.7 | 2 | -- | -- |
| 348.98 | 0.872 | 9.88 | -- | -- | -- | -- | -- | -0.346 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.69 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 162.10 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 7 | 162.81 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 21 | 164.00 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 25 | 164.40 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 27 | 164.46 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 29 | 164.53 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 18 |
| 31 | 164.58 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 17 |
| 39 | 164.66 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 13 |
| 44 | 164.72 | wind | 9 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 61 | 165.06 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 67 | 165.21 | radiation | 1 | 1440 | > th | dose independent | sin | 14 | NA |
| 70 | 165.29 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 77 | 165.41 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 79 | 165.45 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 82 | 165.51 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 114 | 166.00 | wind | 9 | 43200 | < th | dose independent | sin | 17 | NA |
| 122 | 166.08 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 13 |
| 128 | 166.13 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 140 | 166.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 146 | 166.22 | wind | 9 | 43200 | > th | dose independent | sin | 17 | NA |
| 186 | 166.62 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 192 | 166.68 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 194 | 166.70 | wind | 7 | 43200 | > th | dose dependent | sin | 17 | NA |
| 199 | 166.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 204 | 166.80 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 248 | 167.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 258 | 167.15 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 261 | 167.18 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 13 |
| 263 | 167.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 266 | 167.20 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 269 | 167.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 281 | 167.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 282 | 167.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 284 | 167.25 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 286 | 167.26 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 289 | 167.26 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 291 | 167.26 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 294 | 167.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 296 | 167.27 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 305 | 167.28 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 331 | 167.32 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 336 | 167.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 337 | 167.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 347 | 167.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 397 | 167.46 | wind | 7 | 43200 | > th | dose independent | sin | 20 | NA |
| 442 | 167.53 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 490 | 167.65 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 525 | 167.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 534 | 167.75 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 583 | 167.81 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 603 | 167.82 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 613 | 167.84 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 727 | 168.02 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 743 | 168.05 | humidity | 80 | 1440 | < th | dose dependent | sin | 23 | NA |
| 773 | 168.12 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 793 | 168.16 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 804 | 168.17 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 805 | 168.17 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 823 | 168.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 825 | 168.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 847 | 168.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 889 | 168.28 | radiation | 1 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 891 | 168.28 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 909 | 168.30 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 937 | 168.32 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 938 | 168.32 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 953 | 168.35 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 4 |