Os02g0273900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0273900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.22 | 0.536 | 4.31 | 0.389 | 1.22 | 2.84 | 1.39 | -1.4 | 0.159 | 17.8 | 23.38 | 255 | -- | -- |
| 130.88 | 0.533 | 4.29 | 0.583 | 1.24 | 2.74 | 1.2 | -- | 0.208 | 17.8 | 23.14 | 257 | -- | -- |
| 133.93 | 0.539 | 4.28 | 0.584 | 1.23 | 2.76 | -- | -0.068 | 0.217 | 17.7 | 23.3 | 259 | -- | -- |
| 133.9 | 0.539 | 4.29 | 0.588 | 1.22 | 2.78 | -- | -- | 0.215 | 17.7 | 23.3 | 259 | -- | -- |
| 176.07 | 0.618 | 4.31 | 0.303 | -- | 3.94 | -- | -1.55 | 0.107 | -- | 24.17 | 324 | -- | -- |
| 256.8 | 0.751 | 4.23 | 1.14 | 2.43 | -- | 2.2 | -- | 0.588 | 17.3 | -- | -- | -- | -- |
| 268.82 | 0.768 | 4.22 | 1.14 | 2.45 | -- | -- | -- | 0.598 | 17.3 | -- | -- | -- | -- |
| 177.75 | 0.621 | 4.28 | 0.424 | -- | 3.74 | -- | -- | 0.151 | -- | 24.1 | 314 | -- | -- |
| 142.33 | 0.556 | 4.31 | -- | 1.17 | 2.93 | -- | -- | 0.115 | 17.8 | 23.04 | 259 | -- | -- |
| 580.97 | 1.13 | 4.19 | 1.05 | -- | -- | -- | -- | 0.537 | -- | -- | -- | -- | -- |
| 302.98 | 0.814 | 4.25 | -- | 2.43 | -- | -- | -- | 0.471 | 17.3 | -- | -- | -- | -- |
| 182.37 | 0.629 | 4.29 | -- | -- | 3.81 | -- | -- | 0.0978 | -- | 24.09 | 314 | -- | -- |
| 610.27 | 1.15 | 4.21 | -- | -- | -- | -- | -- | 0.42 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 12 |
| 2 | 130.71 | temperature | 20 | 90 | > th | dose dependent | sin | 20 | NA |
| 6 | 131.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 7 | 131.43 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 9 | 131.56 | temperature | 20 | 270 | > th | dose dependent | sin | 22 | NA |
| 53 | 135.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 66 | 136.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 13 |
| 68 | 136.21 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 91 | 136.96 | temperature | 20 | 720 | > th | dose dependent | sin | 2 | NA |
| 103 | 137.20 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 114 | 137.31 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 150 | 138.17 | temperature | 25 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 577 | 147.88 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 13 |
| 591 | 148.17 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 613 | 148.54 | temperature | 25 | 270 | > th | dose independent | sin | 21 | NA |
| 624 | 148.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 680 | 149.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 8 |
| 693 | 149.63 | temperature | 25 | 270 | < th | dose independent | sin | 21 | NA |
| 908 | 153.27 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 13 |