Os02g0272900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os02g0272900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.57 | 0.494 | 6.47 | 1.53 | 0.528 | -2.48 | -0.751 | -2.38 | 0.665 | 11.9 | 19.11 | 5976 | -- | -- |
| 111.81 | 0.492 | 6.5 | 1.51 | 0.527 | -1.54 | -0.655 | -- | 0.676 | 12.2 | 18.79 | 5981 | -- | -- |
| 112.82 | 0.495 | 6.48 | 1.52 | 0.531 | -2.54 | -- | -2.41 | 0.674 | 12 | 18.7 | 5961 | -- | -- |
| 113.83 | 0.497 | 6.52 | 1.53 | 0.53 | -1.44 | -- | -- | 0.662 | 12 | 19.4 | 5973 | -- | -- |
| 129.74 | 0.531 | 6.33 | 1.29 | -- | -6.89 | -- | -11.6 | 0.687 | -- | 17.5 | 5994 | -- | -- |
| 126.83 | 0.528 | 6.48 | 2.16 | 0.525 | -- | -0.789 | -- | 0.857 | 11.8 | -- | -- | -- | -- |
| 129.52 | 0.533 | 6.48 | 2.13 | 0.528 | -- | -- | -- | 0.853 | 11.9 | -- | -- | -- | -- |
| 131.51 | 0.534 | 6.53 | 1.54 | -- | -1.46 | -- | -- | 0.661 | -- | 19.18 | 5973 | -- | -- |
| 131.8 | 0.535 | 6.62 | -- | 0.548 | -1.84 | -- | -- | 0.242 | 11.9 | 20.03 | 47520 | -- | -- |
| 147.1 | 0.567 | 6.49 | 2.12 | -- | -- | -- | -- | 0.846 | -- | -- | -- | -- | -- |
| 249.24 | 0.738 | 6.53 | -- | 0.502 | -- | -- | -- | 0.616 | 11.7 | -- | -- | -- | -- |
| 150.65 | 0.572 | 6.63 | -- | -- | -1.82 | -- | -- | 0.248 | -- | 19.8 | 47520 | -- | -- |
| 265.11 | 0.76 | 6.54 | -- | -- | -- | -- | -- | 0.612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.13 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 3 | 105.66 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 6 | 106.18 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 10 | 106.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 11 | 106.34 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 15 | 106.43 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 20 | 106.52 | wind | 1.0 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 27 | 106.75 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 29 | 106.76 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 37 | 106.85 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 38 | 106.85 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 39 | 106.85 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 42 | 106.88 | humidity | 80.0 | 43200 | > th | dose independent | no | NA | NA |
| 43 | 106.88 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 47 | 106.90 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 49 | 106.90 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 51 | 106.91 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 52 | 106.91 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 54 | 106.92 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 59 | 106.95 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 1 | 15 |
| 61 | 106.96 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 63 | 106.97 | humidity | 80.0 | 43200 | < th | dose independent | no | NA | NA |
| 67 | 106.97 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 75 | 107.02 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 80 | 107.05 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 99 | 107.11 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 104 | 107.12 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 115 | 107.15 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 118 | 107.18 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 123 | 107.19 | humidity | 80.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 124 | 107.19 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 134 | 107.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 145 | 107.24 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 176 | 107.31 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 177 | 107.31 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 183 | 107.34 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 197 | 107.36 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 212 | 107.38 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 238 | 107.42 | humidity | 60.0 | 43200 | > th | dose dependent | no | NA | NA |
| 248 | 107.44 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 251 | 107.45 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 257 | 107.46 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 258 | 107.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 20 |
| 260 | 107.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 262 | 107.46 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 275 | 107.48 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 282 | 107.49 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 285 | 107.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 288 | 107.50 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 294 | 107.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 15 |
| 311 | 107.53 | humidity | 80.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 312 | 107.53 | humidity | 80.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 315 | 107.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 320 | 107.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 15 |
| 332 | 107.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 353 | 107.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 359 | 107.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 365 | 107.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 369 | 107.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 375 | 107.60 | wind | 9.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 390 | 107.62 | wind | 9.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 396 | 107.62 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 399 | 107.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 409 | 107.64 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 426 | 107.65 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 436 | 107.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 438 | 107.66 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 454 | 107.67 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 474 | 107.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 498 | 107.70 | wind | 9.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 511 | 107.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 514 | 107.71 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 17 |
| 537 | 107.73 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 579 | 107.75 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 616 | 107.78 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 620 | 107.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 630 | 107.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 632 | 107.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 635 | 107.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 646 | 107.79 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 22 |
| 648 | 107.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 650 | 107.79 | wind | 9.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 652 | 107.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 661 | 107.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 22 |
| 670 | 107.81 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 685 | 107.82 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 691 | 107.83 | wind | 3.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 698 | 107.83 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 18 |
| 719 | 107.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 722 | 107.85 | humidity | 80.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 753 | 107.87 | wind | 3.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 776 | 107.88 | wind | 9.0 | 43200 | < th | dose independent | no | NA | NA |
| 792 | 107.89 | wind | 9.0 | 43200 | > th | dose independent | no | NA | NA |
| 815 | 107.90 | wind | 1.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 839 | 107.92 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 18 |
| 855 | 107.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 865 | 107.94 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 2 | 11 |
| 868 | 107.94 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 17 |
| 936 | 107.99 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 18 |
| 950 | 108.00 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 17 | 21 |
| 971 | 108.01 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 17 |
| 996 | 108.03 | wind | 9.0 | 14400 | < th | dose dependent | sin | 6 | NA |