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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0271600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.67 (0.0515) R2 : 0.406
β1 : 0.907 (0.189) R2dD : 0.0313 R2D : -0.033
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.84 (0.132) R2dE : 0.255 R2E : 0.248
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.02 (0.11) R2dN8 : 0.15 R2N8 : 0.127
σ : 0.963
deviance : 427.77
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 70.77
memory length : 826
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 15.1
open length of G : 6.1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
405.43 0.946 3.67 0.833 0.491 1.81 -0.722 1.83 1.01 6.88 70.77 772 15.1 5.65
413.27 0.947 3.68 0.97 0.403 1.93 -1.54 -- 0.942 9.12 70.99 754 15.5 5.53
406.43 0.939 3.67 0.822 0.514 1.87 -- 1.92 1.01 7.35 70.86 771 15.1 5.55
420.46 0.955 3.67 0.917 0.549 2.07 -- -- 0.983 9.29 70.04 756 15.4 5.66
414.75 0.949 3.67 0.847 -- 1.84 -- 1.93 1.04 -- 70.61 829 15 6.1
490.25 1.04 3.65 0.813 1.38 -- 1.02 -- 1.13 2.01 -- -- -- --
494.09 1.04 3.65 0.781 1.39 -- -- -- 1.13 2.16 -- -- -- --
427.77 0.963 3.67 0.907 -- 1.84 -- -- 1.02 -- 70.77 826 15.1 6.1
442.22 0.979 3.67 -- 0.544 2.05 -- -- 0.927 9.01 70.09 754 15.3 5.78
609.68 1.15 3.64 0.839 -- -- -- -- 1.16 -- -- -- -- --
510.17 1.06 3.67 -- 1.41 -- -- -- 1.04 2.18 -- -- -- --
442.41 0.98 3.69 -- -- 1.95 -- -- 0.918 -- 75.96 725 16.1 6.28
628.26 1.17 3.66 -- -- -- -- -- 1.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 409.04 radiation 1 720 < th dose dependent rect. 7 20
3 410.48 humidity 70 720 > th dose independent rect. 15 6
4 410.70 humidity 60 720 > th dose dependent rect. 16 5
7 412.11 humidity 70 720 > th dose independent rect. 15 13
10 412.63 humidity 80 720 > th dose independent rect. 9 13
12 412.94 radiation 1 720 < th dose dependent rect. 13 14
35 414.51 radiation 1 720 < th dose independent rect. 7 20
43 415.06 humidity 50 720 > th dose dependent sin 17 NA
54 415.75 humidity 60 720 > th dose dependent rect. 9 14
55 415.81 humidity 60 720 > th dose dependent sin 19 NA
57 415.86 radiation 1 720 < th dose dependent sin 20 NA
75 416.66 humidity 50 720 > th dose dependent rect. 15 12
88 417.27 humidity 80 720 > th dose independent sin 19 NA
99 417.72 radiation 1 720 < th dose independent rect. 16 11
101 417.81 radiation 1 720 < th dose independent rect. 14 13
107 418.05 humidity 70 720 > th dose independent sin 14 NA
144 418.90 humidity 50 720 > th dose dependent rect. 11 16
152 419.14 radiation 1 720 < th dose independent sin 20 NA
162 419.48 radiation 1 720 < th dose dependent rect. 6 13
269 421.96 humidity 90 720 < th dose dependent rect. 14 11
274 422.03 temperature 30 720 < th dose independent rect. 15 6
331 423.53 humidity 90 720 < th dose dependent sin 15 NA
334 423.57 humidity 80 720 < th dose dependent sin 13 NA
335 423.58 humidity 70 720 < th dose independent rect. 14 6
358 423.71 radiation 1 720 < th dose independent rect. 6 13
373 423.88 temperature 30 720 < th dose independent rect. 15 13
379 423.91 radiation 1 720 < th dose independent rect. 7 16
387 423.94 humidity 80 720 > th dose independent rect. 24 22
409 424.27 humidity 80 720 < th dose independent rect. 12 10
418 424.42 humidity 80 720 < th dose independent sin 18 NA
424 424.49 humidity 80 720 > th dose independent rect. 2 20
432 424.70 radiation 1 720 < th dose dependent rect. 12 7
441 424.74 humidity 70 720 > th dose dependent rect. 19 1
522 425.60 humidity 70 720 < th dose independent sin 14 NA
566 426.05 temperature 30 14400 > th dose independent rect. 17 1
611 426.42 temperature 30 720 < th dose independent rect. 15 16
626 426.55 temperature 30 14400 < th dose independent rect. 17 1
646 426.73 atmosphere 1005 720 > th dose independent rect. 16 2
647 426.74 temperature 30 14400 < th dose independent rect. 17 7
653 426.81 temperature 30 14400 < th dose independent rect. 17 15
655 426.82 temperature 30 14400 < th dose independent rect. 17 5
660 426.84 radiation 1 720 < th dose independent rect. 12 11
680 426.92 temperature 30 14400 < th dose independent rect. 17 11
765 427.66 temperature 30 14400 > th dose dependent rect. 17 1
793 427.90 humidity 80 720 < th dose independent rect. 8 17
865 428.36 radiation 1 720 < th dose independent rect. 12 7