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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0271000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Subtilase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.4 (0.053) R2 : 0.526
β1 : 0.92 (0.192) R2dD : 0.024 R2D : -0.0169
β2 : 3.67 (0.281) R2dC : 0.75 R2C : -1.12
β3 : 6.03 (0.335) R2dE : 1.44 R2E : -0.34
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.16 (0.112) R2dN8 : 0.152 R2N8 : 0.132
σ : 0.979
deviance : 441.93
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_____
C
peak time of C : 18.6
E
wheather : humidity
threshold : 72
memory length : 705
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 7.55
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
433.11 0.978 4.38 0.93 2.99 5.43 3.2 2.98 1.19 18.6 71.19 725 8.01 --
438.12 0.975 4.39 0.934 3.04 5.37 1.38 -- 1.2 19 72 730 7.8 --
442.92 0.98 4.4 0.942 3.64 6.03 -- -0.135 1.14 18.5 72.07 693 7.56 --
441.93 0.979 4.4 0.92 3.67 6.03 -- -- 1.16 18.6 72 705 7.55 --
552.15 1.09 4.15 1.17 -- 5.46 -- -2.11 1.63 -- 70.32 2088 10.1 --
557.91 1.11 4.28 0.785 1.95 -- 0.403 -- 1.31 2.28 -- -- -- --
558.49 1.11 4.28 0.774 1.95 -- -- -- 1.31 2.32 -- -- -- --
481.26 1.02 4.25 0.732 -- 3.79 -- -- 1.72 -- 72 2091 10.6 --
463.46 1 4.41 -- 3.85 6.24 -- -- 1.08 18.8 72.4 709 7.29 --
784.5 1.31 4.26 0.856 -- -- -- -- 1.36 -- -- -- -- --
574.26 1.12 4.3 -- 1.97 -- -- -- 1.22 2.33 -- -- -- --
480.88 1.02 4.23 -- -- 3.43 -- -- 1.5 -- 71.67 1924 8.74 --
803.83 1.32 4.29 -- -- -- -- -- 1.26 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 432.32 humidity 70 720 > th dose independent rect. 15 12
2 432.84 humidity 70 720 > th dose independent rect. 15 6
6 435.57 humidity 70 720 > th dose independent sin 14 NA
10 436.42 humidity 70 720 > th dose independent rect. 15 16
15 437.41 humidity 50 720 > th dose dependent sin 17 NA
24 438.98 humidity 60 720 > th dose dependent rect. 15 6
35 440.73 humidity 60 720 > th dose dependent rect. 15 8
38 440.84 humidity 50 720 > th dose dependent rect. 15 10
40 441.05 humidity 50 720 > th dose dependent rect. 15 12
62 443.32 humidity 60 720 > th dose dependent rect. 11 12
68 444.00 humidity 50 720 > th dose dependent rect. 11 16
73 444.29 humidity 80 720 > th dose independent rect. 11 11
91 445.27 radiation 1 720 < th dose independent rect. 6 21
92 445.35 radiation 1 720 < th dose dependent rect. 6 21
101 446.04 humidity 80 720 < th dose dependent sin 13 NA
109 446.60 humidity 70 720 < th dose independent sin 13 NA
158 448.45 humidity 80 720 < th dose dependent rect. 16 14
181 449.16 humidity 90 720 < th dose dependent rect. 16 8
183 449.20 humidity 70 720 < th dose independent rect. 15 5
197 449.27 humidity 50 720 > th dose dependent rect. 15 16
239 450.17 humidity 90 720 < th dose dependent rect. 14 10
309 451.75 humidity 90 720 < th dose dependent rect. 14 14
432 454.40 temperature 30 720 < th dose independent rect. 15 6
441 454.61 humidity 70 14400 < th dose independent rect. 18 1
445 454.67 radiation 1 720 < th dose dependent rect. 11 16
542 455.85 radiation 1 720 < th dose dependent rect. 6 13
544 455.88 temperature 30 14400 > th dose independent rect. 17 2
564 455.97 radiation 1 720 < th dose independent rect. 6 13
590 456.08 humidity 70 1440 > th dose independent rect. 10 20
595 456.10 humidity 70 1440 > th dose independent rect. 10 18
612 456.22 temperature 30 14400 < th dose independent rect. 17 7
622 456.24 radiation 1 720 < th dose independent rect. 11 16
624 456.25 temperature 30 14400 < th dose independent rect. 17 5
625 456.25 temperature 30 14400 < th dose independent rect. 17 15
627 456.26 temperature 30 14400 < th dose independent rect. 17 2
655 456.49 temperature 30 720 < th dose independent rect. 15 12
656 456.52 temperature 30 720 < th dose independent rect. 15 16
752 457.33 temperature 30 14400 > th dose dependent rect. 15 3
753 457.33 humidity 50 720 > th dose dependent rect. 11 20
818 457.58 temperature 30 720 < th dose independent rect. 15 14
839 457.65 humidity 70 14400 < th dose independent rect. 17 14
848 457.70 humidity 70 14400 > th dose independent rect. 18 13
852 457.75 humidity 70 14400 > th dose independent rect. 18 2
881 458.02 humidity 70 14400 < th dose independent rect. 17 5
897 458.07 humidity 70 14400 > th dose independent rect. 18 6
920 458.16 humidity 70 1440 < th dose independent rect. 11 9
933 458.17 humidity 80 1440 < th dose dependent rect. 11 19
939 458.20 humidity 70 14400 > th dose independent rect. 18 10