Os02g0270200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilase.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0270200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Subtilase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 434.21 | 0.979 | 3.39 | -0.221 | 0.395 | -0.619 | 0.0698 | 1.43 | 0.0667 | 1.39 | 1006 | 434 | -- | -- |
| 444.37 | 0.982 | 3.39 | -0.252 | 0.411 | -0.58 | -0.0772 | -- | 0.00137 | 1.63 | 1006 | 406 | -- | -- |
| 434.19 | 0.97 | 3.39 | -0.22 | 0.393 | -0.62 | -- | 1.46 | 0.0664 | 1.38 | 1006 | 457 | -- | -- |
| 444.38 | 0.982 | 3.39 | -0.243 | 0.409 | -0.584 | -- | -- | 0.00724 | 1.69 | 1006 | 406 | -- | -- |
| 443.6 | 0.981 | 3.38 | -0.2 | -- | -0.623 | -- | 1.51 | 0.0778 | -- | 1006 | 488 | -- | -- |
| 469.45 | 1.02 | 3.45 | -0.239 | 0.405 | -- | -0.0191 | -- | -0.239 | 0.576 | -- | -- | -- | -- |
| 469.45 | 1.01 | 3.45 | -0.238 | 0.405 | -- | -- | -- | -0.239 | 0.562 | -- | -- | -- | -- |
| 454.54 | 0.993 | 3.38 | -0.225 | -- | -0.58 | -- | -- | 0.0192 | -- | 1006 | 419 | -- | -- |
| 445.95 | 0.984 | 3.39 | -- | 0.409 | -0.58 | -- | -- | 0.0269 | 1.64 | 1006 | 406 | -- | -- |
| 479.71 | 1.02 | 3.44 | -0.224 | -- | -- | -- | -- | -0.232 | -- | -- | -- | -- | -- |
| 470.94 | 1.02 | 3.44 | -- | 0.401 | -- | -- | -- | -0.213 | 0.533 | -- | -- | -- | -- |
| 455.88 | 0.994 | 3.38 | -- | -- | -0.581 | -- | -- | 0.0399 | -- | 1006 | 419 | -- | -- |
| 481.03 | 1.02 | 3.44 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 431.75 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 2 | 431.78 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 3 | 432.15 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 18 | 9 |
| 4 | 432.52 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 9 | 432.99 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 19 | 433.76 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 20 | 433.77 | wind | 1.0 | 270 | < th | dose independent | rect. | 15 | 13 |
| 25 | 433.92 | wind | 1.0 | 270 | < th | dose independent | rect. | 10 | 18 |
| 27 | 433.99 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 11 | NA |
| 28 | 434.01 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 16 |
| 31 | 434.12 | atmosphere | 1005.0 | 270 | < th | dose independent | sin | 11 | NA |
| 35 | 434.23 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 10 |
| 63 | 434.98 | atmosphere | 1005.0 | 720 | < th | dose independent | sin | 14 | NA |
| 81 | 435.61 | atmosphere | 1005.0 | 720 | > th | dose independent | sin | 14 | NA |
| 85 | 435.68 | wind | 1.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 99 | 436.03 | wind | 1.0 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 108 | 436.17 | wind | 1.0 | 270 | < th | dose dependent | rect. | 12 | 16 |
| 111 | 436.23 | wind | 1.0 | 270 | < th | dose dependent | rect. | 9 | 19 |
| 115 | 436.30 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 116 | 436.31 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 122 | 436.42 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 125 | 436.43 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 151 | 436.97 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 1 | 9 |
| 156 | 436.99 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 166 | 437.23 | atmosphere | 1005.0 | 90 | > th | dose independent | sin | 8 | NA |
| 196 | 437.72 | atmosphere | 1005.0 | 30 | < th | dose independent | sin | 8 | NA |
| 203 | 437.85 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 256 | 438.51 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 296 | 438.95 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 325 | 439.24 | wind | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 364 | 439.61 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 398 | 440.03 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 414 | 440.21 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 21 |
| 416 | 440.22 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 420 | 440.26 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 23 |
| 423 | 440.30 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 426 | 440.32 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 461 | 440.58 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 19 | 16 |
| 489 | 440.81 | wind | 1.0 | 30 | < th | dose dependent | rect. | 3 | 2 |
| 496 | 440.87 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 2 | 8 |
| 506 | 440.97 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 508 | 440.98 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 522 | 441.07 | atmosphere | 1005.0 | 270 | > th | dose independent | no | NA | NA |
| 543 | 441.21 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 562 | 441.31 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 604 | 441.59 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 2 | 5 |
| 638 | 441.82 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 664 | 442.02 | atmosphere | 1005.0 | 270 | < th | dose independent | no | NA | NA |
| 676 | 442.09 | humidity | 80.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 730 | 442.37 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 17 | 18 |
| 782 | 442.69 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 18 | 23 |
| 801 | 442.79 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 822 | 442.92 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 829 | 442.95 | precipitation | 0.1 | 10 | > th | dose independent | sin | 22 | NA |
| 836 | 442.99 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 853 | 443.07 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 863 | 443.11 | precipitation | 0.1 | 10 | < th | dose independent | sin | 22 | NA |
| 865 | 443.11 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 22 | NA |
| 871 | 443.18 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 19 | 12 |
| 872 | 443.19 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 13 |
| 886 | 443.29 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 901 | 443.38 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 907 | 443.41 | temperature | 30.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 921 | 443.44 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 925 | 443.46 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 22 | 11 |
| 944 | 443.56 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 980 | 443.68 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 984 | 443.70 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 23 | 2 |