Os02g0269600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilase.
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Os02g0269600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 870.6 | 1.39 | 4.29 | 4.55 | 0.741 | 7.32 | 2.15 | 9.75 | 2.65 | 1.74 | 1.178 | 11516 | -- | -- |
| 938.45 | 1.43 | 4.03 | 6.41 | 1.31 | 6.37 | 1.7 | -- | 3.12 | 24 | 1.65 | 11319 | -- | -- |
| 885.71 | 1.39 | 4.31 | 4.33 | 0.602 | 7.55 | -- | 10.4 | 2.63 | 3.09 | 1.175 | 11561 | -- | -- |
| 956.99 | 1.44 | 4.05 | 6.46 | 1.3 | 6.63 | -- | -- | 3.2 | 0.0857 | 1.645 | 11314 | -- | -- |
| 872.24 | 1.38 | 4.31 | 4.33 | -- | 7.69 | -- | 10.5 | 2.52 | -- | 1.37 | 11719 | -- | -- |
| 1823.24 | 2 | 4.41 | 4.94 | 0.487 | -- | 1.75 | -- | 1.48 | 1.33 | -- | -- | -- | -- |
| 1834.17 | 2.01 | 4.41 | 4.88 | 0.526 | -- | -- | -- | 1.46 | 2.63 | -- | -- | -- | -- |
| 882.98 | 1.38 | 3.98 | 6.75 | -- | 6.36 | -- | -- | 3.38 | -- | 1.55 | 16076 | -- | -- |
| 1839.09 | 2 | 4.25 | -- | 1.32 | 6.61 | -- | -- | 2.54 | 23.5 | 5.47 | 9779 | -- | -- |
| 1850.37 | 2.01 | 4.41 | 4.9 | -- | -- | -- | -- | 1.48 | -- | -- | -- | -- | -- |
| 2461.59 | 2.32 | 4.54 | -- | 0.622 | -- | -- | -- | 0.919 | 2.73 | -- | -- | -- | -- |
| 1850.76 | 2 | 4.18 | -- | -- | 5.61 | -- | -- | 2.64 | -- | 6.41 | 8880 | -- | -- |
| 2484.1 | 2.33 | 4.53 | -- | -- | -- | -- | -- | 0.932 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 820.44 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 3 | 821.89 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 5 | 825.35 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 11 | 828.37 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 14 | 829.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 15 | 829.80 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 18 | 830.58 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 14 |
| 25 | 832.16 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 35 | 833.27 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 37 | 833.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 70 | 838.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 76 | 839.38 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 81 | 839.78 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 12 |
| 92 | 840.55 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 118 | 844.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 123 | 844.44 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 137 | 845.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 145 | 846.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 187 | 850.40 | humidity | 90 | 43200 | < th | dose independent | sin | 21 | NA |
| 196 | 850.82 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 202 | 851.12 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 211 | 852.15 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 221 | 852.61 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 222 | 852.62 | temperature | 20 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 224 | 852.63 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 225 | 852.66 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 227 | 852.73 | temperature | 10 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 237 | 853.15 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 239 | 853.16 | humidity | 90 | 43200 | > th | dose dependent | sin | 20 | NA |
| 243 | 853.47 | humidity | 90 | 43200 | > th | dose independent | sin | 21 | NA |
| 244 | 853.48 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 254 | 854.06 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 261 | 854.33 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 272 | 854.86 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 289 | 856.03 | temperature | 25 | 43200 | < th | dose dependent | sin | 21 | NA |
| 297 | 856.39 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 324 | 857.62 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 335 | 858.02 | temperature | 25 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 342 | 858.37 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 363 | 859.03 | temperature | 25 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 368 | 859.31 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 379 | 859.62 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 411 | 860.65 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 449 | 861.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 472 | 862.35 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 480 | 862.51 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 484 | 862.54 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 526 | 863.67 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 541 | 864.28 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 575 | 865.04 | temperature | 25 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 621 | 866.25 | temperature | 20 | 43200 | > th | dose independent | sin | 19 | NA |
| 658 | 867.00 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 670 | 867.18 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 705 | 867.52 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 736 | 868.28 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 12 |
| 765 | 868.60 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 786 | 868.67 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 788 | 868.68 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 861 | 869.68 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 897 | 870.17 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 908 | 870.26 | temperature | 25 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 948 | 870.87 | radiation | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 978 | 871.10 | radiation | 1 | 14400 | > th | dose independent | sin | 11 | NA |