Os02g0267700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha-expansin OsEXPA14.
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Os02g0267700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha-expansin OsEXPA14.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 462.23 | 1.01 | 3.3 | 0.178 | 0.491 | -1.08 | 0.571 | -0.5 | -0.332 | 11.4 | 4.974 | 659 | -- | -- |
| 462.44 | 1 | 3.3 | 0.172 | 0.488 | -1.02 | 0.529 | -- | -0.33 | 11.4 | 4.913 | 658 | -- | -- |
| 463.41 | 1 | 3.29 | 0.198 | 0.49 | -1.05 | -- | -0.0376 | -0.322 | 11.6 | 4.941 | 658 | -- | -- |
| 463.41 | 1 | 3.29 | 0.196 | 0.49 | -1.04 | -- | -- | -0.321 | 11.6 | 4.953 | 658 | -- | -- |
| 473.27 | 1.01 | 3.3 | 0.163 | -- | -0.658 | -- | 0.134 | -0.328 | -- | 5 | 394 | -- | -- |
| 476.45 | 1.02 | 3.3 | -0.0732 | 0.312 | -- | 0.474 | -- | -0.345 | 13.2 | -- | -- | -- | -- |
| 477.04 | 1.02 | 3.3 | -0.0548 | 0.326 | -- | -- | -- | -0.341 | 14.1 | -- | -- | -- | -- |
| 473.17 | 1.01 | 3.3 | 0.105 | -- | -0.692 | -- | -- | -0.337 | -- | 4.987 | 394 | -- | -- |
| 464.3 | 1 | 3.3 | -- | 0.466 | -0.955 | -- | -- | -0.343 | 11.7 | 4.92 | 658 | -- | -- |
| 483.4 | 1.03 | 3.31 | -0.0684 | -- | -- | -- | -- | -0.349 | -- | -- | -- | -- | -- |
| 477.12 | 1.02 | 3.3 | -- | 0.327 | -- | -- | -- | -0.335 | 14.1 | -- | -- | -- | -- |
| 473.42 | 1.01 | 3.31 | -- | -- | -0.662 | -- | -- | -0.348 | -- | 4.992 | 394 | -- | -- |
| 483.52 | 1.03 | 3.3 | -- | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 449.53 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 2 | 2 |
| 9 | 450.73 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 17 | 453.06 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 20 | 454.00 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 21 | 454.03 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 26 | 454.62 | wind | 5.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 27 | 454.77 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 12 | 6 |
| 30 | 455.12 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 31 | 455.29 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 16 | 2 |
| 36 | 455.65 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 47 | 456.34 | wind | 5.0 | 720 | < th | dose independent | rect. | 11 | 14 |
| 60 | 456.78 | wind | 5.0 | 720 | < th | dose independent | rect. | 13 | 12 |
| 94 | 457.42 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 97 | 457.45 | wind | 5.0 | 720 | < th | dose independent | rect. | 7 | 18 |
| 103 | 457.60 | humidity | 80.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 106 | 457.60 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 107 | 457.62 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 116 | 457.73 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 117 | 457.74 | wind | 5.0 | 720 | < th | dose independent | rect. | 13 | 6 |
| 122 | 457.78 | wind | 5.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 124 | 457.81 | wind | 5.0 | 720 | > th | dose independent | rect. | 10 | 11 |
| 145 | 458.12 | wind | 5.0 | 720 | > th | dose independent | rect. | 10 | 15 |
| 151 | 458.19 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 20 |
| 153 | 458.24 | temperature | 20.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 159 | 458.28 | wind | 9.0 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 161 | 458.32 | wind | 5.0 | 720 | < th | dose independent | sin | 19 | NA |
| 194 | 458.62 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 8 |
| 199 | 458.73 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 1 |
| 200 | 458.73 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 228 | 458.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 229 | 458.73 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 270 | 458.82 | wind | 5.0 | 720 | > th | dose independent | sin | 19 | NA |
| 278 | 458.90 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 284 | 458.92 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 10 | 21 |
| 289 | 458.94 | wind | 5.0 | 720 | > th | dose independent | rect. | 16 | 9 |
| 293 | 458.96 | wind | 1.0 | 720 | > th | dose dependent | rect. | 10 | 12 |
| 297 | 458.98 | wind | 7.0 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 298 | 459.00 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 310 | 459.04 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 330 | 459.13 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 8 |
| 331 | 459.15 | wind | 3.0 | 90 | > th | dose dependent | rect. | 16 | 22 |
| 333 | 459.17 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 338 | 459.22 | precipitation | 0.1 | 10 | > th | dose independent | sin | 20 | NA |
| 339 | 459.22 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 20 | NA |
| 370 | 459.41 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 408 | 459.56 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 446 | 459.72 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 13 | 15 |
| 449 | 459.74 | wind | 7.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 474 | 459.86 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 508 | 459.94 | humidity | 80.0 | 90 | < th | dose independent | rect. | 20 | 8 |
| 512 | 459.95 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 518 | 459.96 | wind | 9.0 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 520 | 459.97 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 11 |
| 537 | 460.03 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 556 | 460.09 | wind | 5.0 | 90 | > th | dose independent | rect. | 16 | 22 |
| 603 | 460.29 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 8 |
| 604 | 460.29 | wind | 1.0 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 668 | 460.54 | wind | 1.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 706 | 460.64 | wind | 3.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 714 | 460.67 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 9 |
| 721 | 460.70 | wind | 3.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 729 | 460.75 | wind | 5.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 738 | 460.78 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 772 | 460.88 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 7 |
| 793 | 460.88 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 7 |
| 866 | 460.95 | wind | 5.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 869 | 460.95 | wind | 3.0 | 90 | > th | dose dependent | rect. | 11 | 3 |
| 881 | 460.96 | wind | 5.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 893 | 460.99 | temperature | 20.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 915 | 461.04 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 17 |
| 988 | 461.12 | temperature | 20.0 | 1440 | < th | dose independent | sin | 22 | NA |