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Os02g0267000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Signal peptidase I (EC 3.4.21.89) (Leader peptidase I).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.024) R2 : 0.8
β1 : 1.06 (0.0878) R2dD : 0.0666 R2D : 0.0787
β2 : 1.6 (0.0811) R2dC : 0.288 R2C : 0.543
β3 : 1.31 (0.094) R2dE : 0.147 R2E : 0.422
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.232 (0.0512) R2dN8 : 0.012 R2N8 : 0.0275
σ : 0.447
deviance : 92
__
_____
C
peak time of C : 17.9
E
wheather : wind
threshold : 7.328
memory length : 243
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 6.94
open length of G : 20.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.63 0.445 11.1 0.964 1.68 1.28 -1.15 0.78 -0.233 18 6.438 254 6.95 20.1
90.67 0.443 11.1 0.995 1.66 1.26 -0.925 -- -0.218 18 6.5 253 6.95 20.1
92.18 0.447 11.1 1 1.67 1.25 -- 0.192 -0.243 17.9 6.804 235 7.04 20.4
92 0.447 11.1 1.06 1.6 1.31 -- -- -0.232 17.9 7.328 243 6.94 20.4
127.04 0.525 11 1.34 -- 2.43 -- 0.889 -0.0434 -- 15.87 359 6.72 18.8
129.17 0.533 11.1 1.16 2.33 -- -0.42 -- -0.295 18.2 -- -- -- --
129.6 0.533 11.1 1.17 2.33 -- -- -- -0.297 18.2 -- -- -- --
114.35 0.498 11.1 1.35 -- 2.38 -- -- -0.137 -- 24.32 352 7.48 16.9
118.17 0.506 11.1 -- 1.59 1.37 -- -- -0.289 17.8 6.453 254 7.08 20.2
410.94 0.947 11.1 1.1 -- -- -- -- -0.348 -- -- -- -- --
165.43 0.602 11.2 -- 2.31 -- -- -- -0.427 18.3 -- -- -- --
149.82 0.57 11.1 -- -- 2.42 -- -- -0.303 -- 14.89 388 7 17.2
442.99 0.982 11.1 -- -- -- -- -- -0.47 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.01 wind 7.0 270 < th dose independent rect. 7 20
3 92.91 temperature 15.0 270 > th dose independent rect. 16 15
5 93.49 wind 9.0 270 < th dose dependent rect. 7 20
6 93.70 wind 7.0 270 < th dose independent rect. 8 18
9 94.45 temperature 10.0 270 > th dose dependent rect. 7 8
15 94.85 temperature 10.0 90 > th dose dependent rect. 8 20
18 95.03 wind 9.0 270 < th dose dependent rect. 8 18
20 95.47 wind 5.0 270 < th dose independent rect. 3 4
21 95.66 temperature 20.0 90 > th dose dependent rect. 8 7
23 95.83 temperature 10.0 10 > th dose dependent rect. 8 21
24 95.88 wind 7.0 270 < th dose independent rect. 7 9
27 95.89 precipitation 0.1 270 < th dose independent rect. 3 4
28 95.89 precipitation 0.1 270 < th dose dependent rect. 3 4
37 96.58 temperature 10.0 270 > th dose independent rect. 3 4
39 96.58 temperature 30.0 270 < th dose independent rect. 3 4
40 96.58 humidity 50.0 270 > th dose independent rect. 3 4
42 96.58 atmosphere 995.0 270 > th dose independent rect. 3 4
43 96.58 atmosphere 1015.0 270 < th dose independent rect. 3 4
44 96.58 radiation 40.0 270 < th dose independent rect. 3 4
45 96.58 temperature 10.0 270 > th dose independent rect. 7 20
48 96.70 radiation 40.0 270 < th dose dependent rect. 3 4
49 96.75 precipitation 0.1 270 < th dose independent rect. 7 20
50 96.75 precipitation 0.1 270 < th dose dependent rect. 7 20
63 97.22 wind 7.0 270 < th dose independent rect. 20 7
66 97.30 radiation 1.0 30 > th dose independent rect. 5 3
81 97.41 wind 9.0 270 < th dose dependent rect. 3 4
83 97.45 temperature 20.0 10 > th dose dependent rect. 8 8
87 97.58 radiation 20.0 270 < th dose dependent rect. 3 6
91 97.68 humidity 50.0 270 > th dose dependent rect. 20 7
100 97.83 radiation 40.0 270 < th dose dependent rect. 15 16
102 97.86 temperature 25.0 270 < th dose independent rect. 2 7
130 98.07 temperature 15.0 270 > th dose independent rect. 3 18
132 98.09 radiation 20.0 270 < th dose independent rect. 16 15
141 98.17 wind 5.0 270 < th dose independent rect. 21 5
153 98.35 precipitation 0.1 270 < th dose independent rect. 2 6
154 98.35 precipitation 0.1 270 < th dose dependent rect. 2 6
175 98.46 wind 9.0 270 < th dose dependent rect. 4 2
182 98.52 temperature 10.0 270 > th dose independent rect. 7 9
183 98.52 atmosphere 1015.0 270 < th dose independent rect. 7 9
186 98.52 wind 9.0 270 < th dose dependent rect. 19 8
192 98.57 precipitation 0.1 270 < th dose independent rect. 7 9
193 98.57 precipitation 0.1 270 < th dose dependent rect. 7 9
196 98.65 temperature 10.0 270 > th dose independent rect. 20 7
197 98.65 temperature 30.0 270 < th dose independent rect. 20 7
198 98.65 humidity 50.0 270 > th dose independent rect. 20 7
201 98.65 atmosphere 995.0 270 > th dose independent rect. 20 7
202 98.65 radiation 1.0 270 < th dose independent rect. 20 7
209 98.65 atmosphere 1015.0 270 < th dose independent rect. 3 17
210 98.65 radiation 1.0 270 < th dose dependent rect. 20 7
215 98.66 wind 7.0 270 < th dose independent rect. 2 6
219 98.69 temperature 15.0 270 > th dose independent rect. 13 9
222 98.72 precipitation 0.1 270 < th dose independent rect. 3 17
223 98.72 precipitation 0.1 270 < th dose dependent rect. 3 17
246 98.85 precipitation 0.1 270 < th dose independent rect. 20 7
247 98.85 precipitation 0.1 270 < th dose dependent rect. 20 7
251 98.89 precipitation 0.1 270 < th dose independent rect. 16 15
252 98.89 precipitation 0.1 270 < th dose dependent rect. 16 15
275 98.98 humidity 50.0 270 > th dose dependent rect. 21 5
278 98.99 temperature 10.0 270 > th dose independent rect. 2 6
281 98.99 humidity 50.0 270 > th dose independent rect. 2 6
283 98.99 atmosphere 995.0 270 > th dose independent rect. 2 6
284 98.99 atmosphere 1015.0 270 < th dose independent rect. 2 6
285 98.99 temperature 10.0 270 > th dose independent rect. 8 18
288 99.02 precipitation 0.1 270 < th dose independent rect. 8 18
291 99.02 precipitation 0.1 270 < th dose dependent rect. 8 18
295 99.12 radiation 20.0 270 < th dose independent rect. 2 6
301 99.18 atmosphere 995.0 270 > th dose independent rect. 16 15
329 99.34 radiation 40.0 270 < th dose independent rect. 2 6
347 99.51 temperature 25.0 270 > th dose independent rect. 7 7
349 99.54 temperature 20.0 270 > th dose dependent rect. 8 3
366 99.59 radiation 1.0 90 < th dose dependent sin 11 NA
393 99.65 wind 9.0 270 < th dose independent rect. 16 15
403 99.70 temperature 10.0 90 > th dose dependent rect. 4 4
404 99.70 radiation 20.0 270 < th dose dependent rect. 3 16
413 99.75 radiation 40.0 90 < th dose independent rect. 4 18
424 99.78 temperature 10.0 270 > th dose dependent rect. 22 15
440 99.90 radiation 1.0 30 < th dose independent rect. 22 8
442 99.91 humidity 50.0 270 > th dose independent rect. 16 15
443 99.91 atmosphere 995.0 270 > th dose independent rect. 3 17
447 99.93 radiation 1.0 30 < th dose dependent rect. 22 8
453 99.98 humidity 80.0 270 > th dose independent rect. 21 5
499 100.25 radiation 40.0 10 < th dose dependent rect. 5 18
504 100.28 atmosphere 995.0 270 > th dose independent rect. 7 9
525 100.35 radiation 40.0 1440 < th dose dependent rect. 24 5
531 100.36 temperature 30.0 90 < th dose independent rect. 4 18
533 100.36 humidity 50.0 10 > th dose dependent rect. 22 7
541 100.38 radiation 1.0 270 > th dose independent rect. 7 9
557 100.46 atmosphere 995.0 270 > th dose independent rect. 7 20
592 100.57 humidity 50.0 270 > th dose dependent rect. 3 4
597 100.59 radiation 40.0 90 < th dose dependent rect. 5 17
614 100.66 temperature 25.0 270 > th dose independent rect. 22 16
619 100.69 temperature 25.0 270 < th dose independent rect. 2 17
639 100.77 temperature 30.0 270 < th dose dependent rect. 3 4
680 100.94 humidity 50.0 14400 > th dose independent rect. 5 4
687 100.96 wind 9.0 270 < th dose independent rect. 3 17
688 100.97 atmosphere 1010.0 270 < th dose independent rect. 13 9
692 100.98 temperature 10.0 270 > th dose independent rect. 21 5
693 100.98 temperature 30.0 270 < th dose independent rect. 21 5
694 100.98 humidity 50.0 270 > th dose independent rect. 21 5
697 100.98 atmosphere 995.0 270 > th dose independent rect. 21 5
698 100.98 radiation 1.0 270 < th dose independent rect. 21 5
704 100.98 radiation 1.0 270 < th dose dependent rect. 21 5
713 101.01 temperature 30.0 10 < th dose independent rect. 5 18
764 101.08 precipitation 0.1 270 < th dose independent rect. 21 5
765 101.08 precipitation 0.1 270 < th dose dependent rect. 21 5
770 101.09 precipitation 0.1 270 < th dose independent rect. 2 19
773 101.09 precipitation 0.1 270 < th dose dependent rect. 2 19
807 101.20 temperature 10.0 270 > th dose dependent rect. 4 2
828 101.27 temperature 30.0 90 < th dose dependent rect. 4 17
846 101.36 radiation 1.0 30 < th dose independent sin 10 NA
856 101.40 temperature 30.0 270 < th dose dependent rect. 2 7
879 101.46 atmosphere 995.0 270 > th dose dependent rect. 3 4
887 101.48 wind 9.0 270 < th dose dependent rect. 7 9
905 101.55 wind 1.0 270 > th dose independent rect. 7 9
915 101.58 radiation 1.0 30 > th dose independent sin 10 NA
918 101.58 atmosphere 995.0 270 > th dose dependent rect. 21 5
921 101.59 wind 1.0 270 > th dose independent rect. 3 4
922 101.59 temperature 25.0 270 < th dose independent rect. 2 11
930 101.62 humidity 60.0 270 > th dose dependent rect. 22 3
960 101.64 temperature 10.0 10 > th dose independent rect. 22 7
961 101.64 temperature 30.0 10 < th dose independent rect. 22 7
962 101.64 humidity 50.0 10 > th dose independent rect. 22 7
965 101.64 atmosphere 995.0 10 > th dose independent rect. 22 7
974 101.64 temperature 10.0 10 > th dose independent rect. 5 17
976 101.64 atmosphere 1015.0 10 < th dose independent rect. 5 17
980 101.65 humidity 80.0 270 > th dose independent rect. 22 3