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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0266900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.07 (0.0245) R2 : 0.213
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.14 (0.463) R2dE : 0.213 R2E : 0.213
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0106 (0.0515) R2dN8 : 9.46e-05 R2N8 : -0.000126
σ : 0.461
deviance : 97.36
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_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 997.1
memory length : 3
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 5.42
open length of G : 2.32

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.79 0.456 2.63 2.68 0.158 -99.9 -0.239 609 0.00941 4.54 1000 10 5 1
95.88 0.46 3.07 0.0375 0.156 5.09 -0.248 -- 0.0101 4.51 996.5 13 5.37 2.36
95.94 0.46 2.63 2.68 0.158 -99.9 -- 609 0.0106 4.8 1000 11 5.04 1.34
96.04 0.459 3.07 0.0395 0.155 5.07 -- -- 0.0114 4.77 996.9 4 5.4 2.33
97.25 0.462 2.63 2.69 -- -99.8 -- 609 0.015 -- 1000 11 5.04 1.34
121.49 0.517 3.07 0.0662 0.201 -- -0.079 -- -0.00116 4.95 -- -- -- --
121.5 0.516 3.07 0.0664 0.201 -- -- -- -0.000745 5.04 -- -- -- --
97.31 0.461 3.07 0.045 -- 5.14 -- -- 0.0156 -- 997.1 3 5.42 2.32
96.08 0.459 3.07 -- 0.156 5.07 -- -- 0.007 4.77 997 2 5.42 2.34
123.61 0.52 3.07 0.0737 -- -- -- -- 0.00437 -- -- -- -- --
121.62 0.516 3.07 -- 0.202 -- -- -- -0.00815 5.02 -- -- -- --
97.36 0.461 3.07 -- -- 5.14 -- -- 0.0106 -- 997.1 3 5.42 2.32
123.76 0.519 3.08 -- -- -- -- -- -0.0038 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 95.79 atmosphere 1000.0 10 < th dose independent rect. 5 1
8 95.79 atmosphere 1000.0 10 < th dose dependent rect. 5 1
27 97.01 temperature 25.0 30 > th dose dependent rect. 5 1
31 98.97 temperature 25.0 270 > th dose dependent rect. 2 1
34 100.30 temperature 25.0 30 > th dose independent rect. 5 1
35 101.42 temperature 25.0 270 > th dose independent rect. 2 1
36 101.79 atmosphere 1000.0 10 < th dose independent rect. 1 1
43 101.79 atmosphere 1000.0 10 < th dose dependent rect. 1 1
61 103.41 atmosphere 1000.0 30 > th dose independent rect. 3 23
62 103.50 atmosphere 1005.0 30 > th dose dependent rect. 2 1
64 103.57 atmosphere 1005.0 30 > th dose independent rect. 2 1
68 103.89 wind 1.0 30 < th dose independent rect. 2 1
72 104.03 wind 3.0 30 < th dose dependent rect. 2 1
74 104.10 temperature 20.0 30 > th dose dependent rect. 2 1
82 104.27 temperature 20.0 30 > th dose independent rect. 2 1
87 104.33 temperature 10.0 30 > th dose independent rect. 2 1
89 104.33 temperature 30.0 30 < th dose independent rect. 2 1
90 104.33 humidity 50.0 30 > th dose independent rect. 2 1
95 104.33 atmosphere 1010.0 30 < th dose independent rect. 2 1
97 104.33 radiation 1.0 30 < th dose independent rect. 2 1
102 104.33 precipitation 0.1 30 < th dose independent rect. 2 1
103 104.33 temperature 10.0 30 > th dose independent rect. 3 23
104 104.33 radiation 1.0 30 < th dose dependent rect. 2 1
109 104.33 precipitation 0.1 30 < th dose dependent rect. 2 1
110 104.37 humidity 50.0 30 > th dose dependent rect. 2 1
123 104.92 temperature 30.0 30 < th dose dependent rect. 2 1
129 105.28 radiation 1.0 4320 < th dose dependent rect. 3 1
130 105.38 atmosphere 1015.0 30 < th dose dependent rect. 2 1
134 105.42 wind 9.0 1440 < th dose independent rect. 3 1
135 105.42 temperature 10.0 1440 > th dose independent rect. 3 1
138 105.42 temperature 30.0 1440 < th dose independent rect. 3 1
142 105.42 humidity 50.0 1440 > th dose independent rect. 3 1
152 105.42 atmosphere 995.0 1440 > th dose independent rect. 3 1
153 105.42 radiation 1.0 1440 < th dose independent rect. 3 1
173 105.42 temperature 10.0 1440 > th dose independent rect. 4 23
197 105.77 atmosphere 1000.0 90 < th dose independent rect. 24 7
205 105.93 wind 1.0 30 > th dose independent rect. 2 1
274 106.93 precipitation 0.1 30 < th dose independent rect. 3 23
275 106.93 precipitation 0.1 30 < th dose dependent rect. 3 23
283 107.02 wind 1.0 10 < th dose dependent rect. 5 1
293 107.11 wind 9.0 30 < th dose independent rect. 3 23
331 107.85 atmosphere 1000.0 270 < th dose independent rect. 22 8
349 108.49 wind 1.0 10 < th dose dependent rect. 5 3
375 109.09 atmosphere 1005.0 10 < th dose dependent rect. 1 6
517 110.51 atmosphere 1000.0 720 < th dose independent rect. 21 5
546 110.78 atmosphere 1000.0 270 < th dose independent sin 10 NA
549 110.81 atmosphere 1000.0 90 > th dose independent sin 8 NA
551 110.81 atmosphere 1000.0 90 < th dose independent sin 8 NA
556 110.85 atmosphere 1000.0 10 > th dose independent sin 7 NA
558 110.85 humidity 50.0 30 > th dose independent rect. 3 23
561 110.89 atmosphere 1000.0 10 < th dose independent sin 7 NA
678 111.70 atmosphere 1000.0 270 > th dose independent rect. 18 13
701 111.80 atmosphere 1000.0 270 > th dose independent rect. 21 11
709 111.85 atmosphere 1000.0 720 > th dose independent rect. 21 4
755 112.14 atmosphere 1000.0 90 < th dose dependent sin 7 NA
804 112.36 atmosphere 1000.0 720 > th dose independent rect. 21 8
820 112.41 temperature 25.0 1440 > th dose independent rect. 2 1
876 112.58 atmosphere 1000.0 720 > th dose independent rect. 21 2
881 112.58 temperature 30.0 30 < th dose independent rect. 3 23
922 112.72 atmosphere 1000.0 720 < th dose dependent rect. 19 11
988 112.92 temperature 25.0 1440 > th dose dependent rect. 3 1