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Os02g0266100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, U1-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0156) R2 : 0.659
β1 : 1.17 (0.0571) R2dD : 0.326 R2D : 0.219
β2 : 0.825 (0.0407) R2dC : 0.309 R2C : 0.254
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.411 (0.0333) R2dN8 : 0.153 R2N8 : 0.0331
σ : 0.293
deviance : 39.16
__
_____
C
peak time of C : 17.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.99 0.278 11.5 1.16 0.842 -0.325 0.522 -0.169 0.414 19.2 19.19 10 -- --
35.09 0.276 11.5 1.16 0.845 -0.316 0.462 -- 0.418 19.2 18.05 9 -- --
35.63 0.278 11.5 1.15 0.844 -0.311 -- -0.0282 0.415 19.1 18.05 9 -- --
35.63 0.278 11.5 1.15 0.845 -0.313 -- -- 0.416 19.2 18.04 9 -- --
42.41 0.303 11.5 1.16 -- -0.911 -- -0.95 0.414 -- 2.32 709 -- --
38.78 0.292 11.5 1.17 0.823 -- 0.394 -- 0.41 17.9 -- -- -- --
39.16 0.293 11.5 1.17 0.825 -- -- -- 0.411 17.9 -- -- -- --
41.42 0.3 11.5 1.14 -- -0.977 -- -- 0.398 -- 2.63 703 -- --
69.8 0.389 11.5 -- 0.836 -0.361 -- -- 0.277 19.3 20.11 9 -- --
74.47 0.403 11.5 1.14 -- -- -- -- 0.392 -- -- -- -- --
75.21 0.406 11.5 -- 0.808 -- -- -- 0.281 18 -- -- -- --
75.38 0.404 11.5 -- -- -0.864 -- -- 0.317 -- 10 731 -- --
109.04 0.487 11.5 -- -- -- -- -- 0.265 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.29 temperature 10.0 270 > th dose dependent rect. 7 6
13 32.04 wind 7.0 270 < th dose independent rect. 7 7
14 32.16 temperature 15.0 10 > th dose dependent rect. 9 6
25 32.48 humidity 50.0 270 > th dose independent rect. 7 7
33 32.51 atmosphere 1015.0 270 < th dose independent rect. 14 17
36 32.54 temperature 15.0 270 > th dose independent rect. 7 7
38 32.55 radiation 40.0 270 < th dose independent rect. 13 18
43 32.64 precipitation 0.1 270 < th dose independent rect. 7 7
44 32.64 wind 7.0 270 < th dose independent rect. 8 17
46 32.64 precipitation 0.1 270 < th dose dependent rect. 7 7
47 32.65 wind 5.0 270 < th dose independent rect. 1 7
49 32.66 atmosphere 995.0 270 > th dose independent rect. 7 7
50 32.66 atmosphere 1015.0 270 < th dose independent rect. 7 7
51 32.66 temperature 10.0 270 > th dose independent rect. 14 17
52 32.67 precipitation 0.1 270 < th dose independent rect. 1 7
53 32.67 precipitation 0.1 270 < th dose dependent rect. 1 7
59 32.71 radiation 1.0 270 < th dose dependent rect. 18 9
60 32.73 radiation 20.0 270 < th dose independent rect. 1 7
62 32.74 precipitation 0.1 270 < th dose independent rect. 14 17
64 32.74 precipitation 0.1 270 < th dose dependent rect. 14 17
66 32.76 radiation 1.0 270 > th dose independent rect. 7 7
70 32.77 radiation 1.0 270 < th dose independent rect. 18 9
77 32.81 wind 5.0 270 < th dose independent rect. 2 5
83 32.82 temperature 10.0 270 > th dose independent rect. 18 9
84 32.82 humidity 50.0 270 > th dose independent rect. 18 9
85 32.82 radiation 20.0 270 < th dose independent rect. 18 9
88 32.82 temperature 10.0 270 > th dose independent rect. 3 15
89 32.82 atmosphere 1015.0 270 < th dose independent rect. 3 15
90 32.82 precipitation 0.1 270 < th dose independent rect. 3 15
91 32.82 wind 9.0 270 < th dose independent rect. 14 17
92 32.82 precipitation 0.1 270 < th dose dependent rect. 3 15
93 32.83 wind 1.0 270 > th dose independent rect. 7 7
94 32.83 wind 9.0 270 < th dose independent rect. 18 9
98 32.83 temperature 10.0 270 > th dose dependent rect. 14 17
102 32.85 temperature 10.0 270 > th dose dependent rect. 2 5
103 32.86 radiation 10.0 270 > th dose independent rect. 8 5
104 32.86 atmosphere 995.0 270 > th dose independent rect. 18 9
105 32.86 wind 9.0 270 < th dose dependent rect. 7 7
113 32.90 temperature 10.0 270 > th dose dependent rect. 1 7
122 32.92 temperature 10.0 270 > th dose independent rect. 1 7
124 32.92 temperature 30.0 270 < th dose independent rect. 1 7
125 32.92 humidity 50.0 270 > th dose independent rect. 1 7
127 32.92 atmosphere 995.0 270 > th dose independent rect. 1 7
128 32.92 atmosphere 1015.0 270 < th dose independent rect. 1 7
129 32.92 temperature 10.0 270 > th dose independent rect. 8 17
133 32.93 temperature 30.0 270 < th dose independent rect. 19 8
153 32.94 precipitation 0.1 270 < th dose independent rect. 8 17
154 32.94 wind 7.0 270 < th dose independent rect. 7 19
155 32.94 precipitation 0.1 270 < th dose dependent rect. 8 17
156 32.95 precipitation 0.1 270 < th dose independent rect. 18 9
160 32.95 precipitation 0.1 270 < th dose dependent rect. 18 9
204 33.01 precipitation 0.1 270 < th dose independent rect. 2 5
207 33.01 atmosphere 1010.0 270 < th dose independent rect. 13 7
210 33.01 precipitation 0.1 270 < th dose dependent rect. 2 5
219 33.03 atmosphere 995.0 270 > th dose independent rect. 14 17
221 33.03 wind 9.0 270 < th dose dependent rect. 1 7
239 33.05 temperature 20.0 270 > th dose independent rect. 13 6
244 33.05 wind 7.0 270 < th dose independent rect. 20 17
250 33.06 wind 9.0 270 < th dose dependent rect. 2 5
252 33.06 radiation 40.0 270 < th dose dependent rect. 1 8
258 33.08 humidity 50.0 270 > th dose independent rect. 8 17
264 33.09 humidity 50.0 270 > th dose independent rect. 20 17
271 33.10 radiation 10.0 10 > th dose independent rect. 9 6
283 33.12 temperature 15.0 90 > th dose independent rect. 9 6
295 33.13 radiation 40.0 90 < th dose dependent rect. 15 18
302 33.14 radiation 40.0 90 < th dose dependent rect. 13 20
307 33.15 temperature 10.0 10 > th dose dependent rect. 15 18
309 33.17 precipitation 0.1 90 < th dose independent rect. 9 6
312 33.17 humidity 50.0 270 > th dose independent rect. 7 19
314 33.17 precipitation 0.1 90 < th dose dependent rect. 9 6
321 33.19 radiation 40.0 270 < th dose independent rect. 12 7
325 33.19 radiation 40.0 270 < th dose dependent rect. 2 16
333 33.20 radiation 20.0 270 < th dose dependent rect. 2 16
336 33.21 wind 1.0 270 > th dose independent rect. 13 7
337 33.21 temperature 10.0 270 > th dose independent rect. 13 7
342 33.21 temperature 10.0 270 > th dose independent rect. 20 17
343 33.21 atmosphere 995.0 270 > th dose independent rect. 20 17
345 33.22 atmosphere 1015.0 90 < th dose independent rect. 9 6
355 33.23 temperature 10.0 270 > th dose independent rect. 2 5
357 33.23 temperature 30.0 270 < th dose independent rect. 2 5
358 33.23 humidity 50.0 270 > th dose independent rect. 2 5
360 33.23 atmosphere 995.0 270 > th dose independent rect. 2 5
361 33.23 atmosphere 1015.0 270 < th dose independent rect. 2 5
378 33.23 temperature 10.0 270 > th dose independent rect. 7 19
384 33.24 humidity 90.0 90 < th dose independent rect. 9 6
388 33.24 radiation 40.0 90 < th dose independent rect. 4 16
399 33.25 wind 9.0 270 < th dose independent rect. 3 15
400 33.25 radiation 40.0 270 < th dose independent rect. 2 16
436 33.29 atmosphere 995.0 90 > th dose independent rect. 9 6
440 33.29 precipitation 0.1 270 < th dose independent rect. 7 19
442 33.29 precipitation 0.1 270 < th dose dependent rect. 7 19
445 33.30 radiation 20.0 10 < th dose independent rect. 4 16
465 33.33 atmosphere 1015.0 10 < th dose independent rect. 15 18
503 33.36 atmosphere 995.0 270 > th dose independent rect. 2 17
529 33.38 precipitation 0.1 270 < th dose independent rect. 13 7
536 33.38 precipitation 0.1 270 < th dose dependent rect. 13 7
540 33.39 temperature 25.0 270 > th dose independent rect. 9 3
544 33.39 wind 9.0 270 < th dose independent rect. 13 7
548 33.39 radiation 10.0 270 < th dose independent rect. 2 16
614 33.44 radiation 40.0 10 < th dose dependent rect. 5 15
639 33.46 precipitation 0.1 270 < th dose independent rect. 20 17
648 33.46 precipitation 0.1 270 < th dose dependent rect. 20 17
686 33.51 atmosphere 995.0 270 > th dose independent rect. 13 7
753 33.56 humidity 50.0 270 > th dose dependent rect. 19 7
807 33.61 temperature 15.0 10 > th dose dependent rect. 2 7
813 33.62 radiation 40.0 10 < th dose independent rect. 4 16
816 33.62 radiation 30.0 10 < th dose independent rect. 12 22
820 33.62 radiation 1.0 270 < th dose dependent rect. 5 22
849 33.64 radiation 1.0 90 < th dose dependent sin 12 NA
862 33.65 radiation 40.0 90 < th dose dependent rect. 4 16
905 33.68 humidity 50.0 270 > th dose dependent rect. 2 5
928 33.69 humidity 50.0 270 > th dose dependent rect. 1 7
929 33.69 atmosphere 995.0 270 > th dose dependent rect. 19 7
938 33.70 atmosphere 995.0 270 > th dose independent rect. 8 17
945 33.71 wind 9.0 10 < th dose independent rect. 9 6
992 33.74 temperature 10.0 10 > th dose independent rect. 9 6
994 33.74 atmosphere 995.0 10 > th dose independent rect. 9 6
995 33.74 atmosphere 1015.0 10 < th dose independent rect. 9 6
996 33.74 precipitation 0.1 10 < th dose independent rect. 9 6
999 33.74 temperature 10.0 10 > th dose independent rect. 15 18