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Os02g0265400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). Splice isoform 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0175) R2 : 0.00983
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0782 (0.0368) R2dN8 : 0.0127 R2N8 : 0.00983
σ : 0.329
deviance : 49.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.86 0.273 11.8 -1.26 0.387 -2.9 -0.301 14.6 -0.106 4.34 999.8 275 -- --
36.17 0.282 11.6 -0.363 0.394 -0.457 -0.269 -- -0.113 4.29 997.2 288 -- --
33.98 0.271 11.8 -1.25 0.385 -3.06 -- 15.4 -0.105 4.39 999.6 362 -- --
36.09 0.28 11.6 -0.354 0.374 -0.65 -- -- -0.109 4.58 996.3 577 -- --
41.85 0.301 11.8 -1.3 -- -3.11 -- 15.8 -0.0935 -- 999.8 354 -- --
38.57 0.291 11.6 -0.334 0.393 -- -0.27 -- -0.125 4.28 -- -- -- --
38.77 0.292 11.6 -0.331 0.392 -- -- -- -0.124 4.34 -- -- -- --
43.92 0.309 11.6 -0.347 -- -0.651 -- -- -0.101 -- 996.9 724 -- --
39.49 0.293 11.6 -- 0.385 -0.496 -- -- -0.0757 4.4 996.8 426 -- --
47.03 0.32 11.6 -0.316 -- -- -- -- -0.113 -- -- -- -- --
41.65 0.302 11.6 -- 0.386 -- -- -- -0.0868 4.36 -- -- -- --
47 0.319 11.6 -- -- -0.661 -- -- -0.0638 -- 996.4 804 -- --
49.65 0.329 11.6 -- -- -- -- -- -0.0782 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.32 atmosphere 1015 30 < th dose dependent rect. 19 14
3 32.57 radiation 20 4320 > th dose dependent rect. 16 15
9 32.93 radiation 20 4320 > th dose dependent rect. 16 1
23 32.95 atmosphere 1010 10 < th dose dependent rect. 14 19
29 33.18 radiation 30 4320 < th dose independent rect. 15 17
41 33.35 radiation 20 4320 < th dose independent rect. 16 15
44 33.40 atmosphere 1010 270 < th dose dependent rect. 15 16
49 33.43 atmosphere 1000 270 < th dose independent rect. 13 19
50 33.43 atmosphere 1010 10 < th dose dependent sin 13 NA
64 33.50 temperature 30 4320 > th dose independent rect. 11 1
70 33.50 temperature 30 4320 > th dose dependent rect. 11 1
71 33.51 temperature 30 4320 < th dose independent rect. 11 1
85 33.58 temperature 30 4320 < th dose independent rect. 17 1
86 33.58 temperature 30 4320 > th dose independent rect. 8 4
104 33.59 radiation 20 4320 < th dose independent rect. 16 4
105 33.59 temperature 30 4320 < th dose independent rect. 4 8
109 33.59 temperature 30 4320 < th dose independent rect. 20 16
113 33.60 temperature 30 4320 < th dose independent rect. 8 4
118 33.60 radiation 20 4320 < th dose independent rect. 16 8
121 33.60 temperature 30 4320 < th dose independent rect. 22 14
147 33.63 temperature 10 720 > th dose dependent rect. 19 21
151 33.64 temperature 30 4320 > th dose dependent rect. 8 4
188 33.68 atmosphere 995 270 > th dose dependent rect. 15 12
208 33.70 temperature 30 4320 < th dose independent rect. 17 19
217 33.71 temperature 30 4320 > th dose independent rect. 17 19
236 33.72 temperature 15 90 > th dose dependent rect. 12 23
279 33.75 temperature 15 10 > th dose dependent rect. 12 23
290 33.77 temperature 10 720 > th dose dependent rect. 12 19
292 33.77 temperature 10 720 > th dose dependent rect. 12 23
312 33.80 temperature 10 270 > th dose dependent rect. 10 23
320 33.81 temperature 15 30 > th dose dependent rect. 19 23
321 33.83 temperature 30 4320 > th dose independent rect. 17 1
331 33.83 atmosphere 1010 30 < th dose dependent rect. 12 23
335 33.84 temperature 30 4320 > th dose dependent sin 8 NA
338 33.84 temperature 25 4320 > th dose dependent rect. 6 1
342 33.84 temperature 10 30 > th dose dependent rect. 23 23
381 33.86 temperature 10 720 > th dose dependent rect. 10 21
385 33.87 temperature 30 4320 > th dose independent sin 9 NA
386 33.87 atmosphere 1000 270 > th dose independent no NA NA
404 33.88 atmosphere 1000 270 < th dose independent no NA NA
405 33.88 atmosphere 1000 270 < th dose independent rect. 1 23
406 33.88 atmosphere 1000 270 < th dose independent rect. 23 23
418 33.90 radiation 30 4320 > th dose dependent rect. 15 17
419 33.90 temperature 10 720 > th dose dependent rect. 12 21
421 33.90 temperature 10 720 > th dose dependent rect. 1 23
422 33.91 temperature 30 4320 < th dose independent sin 9 NA
451 33.92 temperature 10 720 > th dose dependent rect. 3 21
455 33.93 atmosphere 995 10 > th dose dependent sin 13 NA
495 33.95 temperature 10 720 > th dose dependent rect. 8 23
537 33.98 temperature 10 720 > th dose dependent rect. 23 23
550 34.00 temperature 20 720 > th dose dependent rect. 23 16
604 34.04 temperature 25 4320 > th dose dependent rect. 24 8
662 34.08 temperature 10 720 > th dose dependent rect. 3 19
669 34.09 radiation 20 4320 > th dose independent rect. 16 16
707 34.13 temperature 10 720 > th dose dependent no NA NA
817 34.19 temperature 10 4320 > th dose dependent rect. 13 2
835 34.20 temperature 20 4320 > th dose dependent rect. 14 1
851 34.21 temperature 15 720 > th dose dependent rect. 1 15
874 34.23 temperature 30 720 < th dose independent rect. 15 2
877 34.23 wind 9 43200 > th dose dependent rect. 20 4
916 34.25 radiation 30 4320 > th dose independent rect. 15 1
961 34.26 wind 9 43200 > th dose dependent rect. 20 7
971 34.26 temperature 15 30 > th dose dependent rect. 19 14
987 34.27 temperature 30 4320 > th dose dependent no NA NA