Os02g0262800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR protein (Fragment).
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Os02g0262800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.25 | 0.55 | 8.89 | -0.32 | 1.84 | -2.24 | -0.261 | -0.261 | 0.592 | 8.24 | 0.3049 | 72 | -- | -- |
| 136.46 | 0.544 | 8.89 | -0.358 | 1.87 | -2.25 | 0.0471 | -- | 0.593 | 8.23 | 0.004743 | 74 | -- | -- |
| 137.37 | 0.546 | 8.89 | -0.329 | 1.83 | -2.26 | -- | -0.148 | 0.591 | 8.2 | 0.31 | 71 | -- | -- |
| 136.44 | 0.544 | 8.9 | -0.365 | 1.87 | -2.25 | -- | -- | 0.577 | 8.22 | 0.002055 | 74 | -- | -- |
| 256.01 | 0.745 | 8.94 | -0.328 | -- | -2.89 | -- | 0.243 | 0.676 | -- | 0.31 | 48 | -- | -- |
| 221.1 | 0.697 | 8.82 | -0.146 | 3.85 | -- | -0.0737 | -- | 0.719 | 10.7 | -- | -- | -- | -- |
| 221.13 | 0.696 | 8.82 | -0.149 | 3.85 | -- | -- | -- | 0.719 | 10.7 | -- | -- | -- | -- |
| 254.79 | 0.747 | 8.93 | -0.347 | -- | -2.84 | -- | -- | 0.657 | -- | 0.46 | 50 | -- | -- |
| 139.9 | 0.551 | 8.88 | -- | 1.9 | -2.2 | -- | -- | 0.621 | 8.32 | 1.34e-06 | 74 | -- | -- |
| 1136.17 | 1.58 | 8.92 | -0.224 | -- | -- | -- | -- | 0.698 | -- | -- | -- | -- | -- |
| 221.71 | 0.697 | 8.82 | -- | 3.85 | -- | -- | -- | 0.736 | 10.7 | -- | -- | -- | -- |
| 257.97 | 0.751 | 8.92 | -- | -- | -2.84 | -- | -- | 0.696 | -- | 0.46 | 50 | -- | -- |
| 1137.49 | 1.57 | 8.92 | -- | -- | -- | -- | -- | 0.723 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.43 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 2 | 129.76 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 3 | 129.86 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 6 | 132.11 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 15 | 133.36 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 16 | 133.63 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 17 | 133.67 | radiation | 1.0 | 90 | > th | dose independent | sin | 13 | NA |
| 18 | 134.32 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 14 |
| 22 | 135.20 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 21 |
| 25 | 135.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 14 |
| 26 | 135.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 27 | 135.40 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 29 | 136.14 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 32 | 136.63 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 10 |
| 33 | 136.63 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 38 | 136.89 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 13 |
| 49 | 137.68 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 15 |
| 50 | 137.72 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 52 | 137.79 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 68 | 138.69 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 69 | 138.69 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 70 | 138.69 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 72 | 138.69 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 73 | 138.69 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 78 | 138.69 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 80 | 138.69 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 82 | 138.81 | wind | 9.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 84 | 138.86 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 114 | 139.34 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 14 |
| 215 | 147.11 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 232 | 147.46 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 239 | 147.88 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 293 | 150.78 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 298 | 150.91 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 301 | 150.97 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 330 | 151.42 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 354 | 152.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 433 | 155.85 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 548 | 157.56 | wind | 9.0 | 10 | < th | dose dependent | rect. | 19 | 10 |
| 556 | 157.66 | radiation | 1.0 | 90 | > th | dose independent | rect. | 11 | 22 |
| 563 | 157.86 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 582 | 158.36 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 21 |
| 644 | 159.44 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 646 | 159.49 | wind | 5.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 678 | 160.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 681 | 160.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 685 | 160.38 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 691 | 160.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 692 | 160.38 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 704 | 160.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 15 |
| 715 | 160.51 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 754 | 161.15 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 760 | 161.30 | wind | 3.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 829 | 162.52 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 837 | 162.80 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 869 | 163.55 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 883 | 163.69 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 23 |
| 962 | 164.70 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 963 | 164.70 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 979 | 164.86 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 984 | 164.96 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 987 | 164.97 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 989 | 164.97 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 990 | 164.97 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 992 | 164.97 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 993 | 164.97 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 994 | 164.97 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 21 |