Os02g0261800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat 2 containing protein.
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Os02g0261800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine-rich repeat 2 containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.42 | 0.31 | 2.84 | 0.17 | 0.103 | -2.07 | 0.126 | 9.29 | 0.0625 | 6.69 | 0.485 | 711 | -- | -- |
| 45.04 | 0.315 | 2.91 | -0.00644 | 0.102 | -0.195 | 0.176 | -- | 0.0568 | 5.96 | 0.485 | 711 | -- | -- |
| 43.45 | 0.307 | 2.84 | 0.171 | 0.103 | -2.09 | -- | 9.36 | 0.0617 | 6.96 | 0.4787 | 710 | -- | -- |
| 44.13 | 0.309 | 2.9 | -0.0427 | 0.114 | 0.38 | -- | -- | 0.0691 | 6.06 | 0.3965 | 1016 | -- | -- |
| 44.01 | 0.309 | 2.84 | 0.179 | -- | -2.14 | -- | 9.51 | 0.0627 | -- | 0.4787 | 710 | -- | -- |
| 45.07 | 0.315 | 2.91 | -0.00835 | 0.101 | -- | 0.163 | -- | 0.0571 | 6.02 | -- | -- | -- | -- |
| 45.13 | 0.315 | 2.91 | -0.00649 | 0.103 | -- | -- | -- | 0.0567 | 6.49 | -- | -- | -- | -- |
| 44.59 | 0.311 | 2.91 | -0.0594 | -- | 0.4 | -- | -- | 0.0709 | -- | 0.327 | 1016 | -- | -- |
| 44.16 | 0.31 | 2.9 | -- | 0.0984 | 0.359 | -- | -- | 0.0753 | 6.84 | 0.3935 | 1016 | -- | -- |
| 45.68 | 0.316 | 2.91 | -0.00391 | -- | -- | -- | -- | 0.0588 | -- | -- | -- | -- | -- |
| 45.13 | 0.314 | 2.91 | -- | 0.103 | -- | -- | -- | 0.0574 | 6.49 | -- | -- | -- | -- |
| 44.67 | 0.311 | 2.9 | -- | -- | 0.365 | -- | -- | 0.0751 | -- | 0.2977 | 1016 | -- | -- |
| 45.68 | 0.315 | 2.91 | -- | -- | -- | -- | -- | 0.0593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.29 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 1 |
| 2 | 33.29 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 38.63 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 14 | 39.59 | wind | 1.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 35 | 39.93 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 61 | 40.06 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 3 | 8 |
| 105 | 40.42 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 6 | NA |
| 108 | 40.45 | wind | 5.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 112 | 40.47 | wind | 5.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 131 | 40.64 | precipitation | 0.1 | 270 | < th | dose independent | sin | 5 | NA |
| 132 | 40.64 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 5 | NA |
| 134 | 40.65 | precipitation | 0.1 | 270 | > th | dose independent | sin | 5 | NA |
| 136 | 40.66 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 6 |
| 139 | 40.66 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 156 | 40.78 | wind | 5.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 243 | 41.51 | wind | 1.0 | 90 | < th | dose independent | rect. | 5 | 1 |
| 292 | 42.17 | wind | 1.0 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 301 | 42.27 | wind | 1.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 314 | 42.36 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 334 | 42.69 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 339 | 42.79 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 8 |
| 363 | 43.00 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 8 |
| 364 | 43.00 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 376 | 43.08 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 377 | 43.08 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 378 | 43.09 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 379 | 43.09 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 383 | 43.09 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 390 | 43.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 392 | 43.10 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 394 | 43.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 397 | 43.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 399 | 43.10 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 401 | 43.10 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 406 | 43.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 407 | 43.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 409 | 43.10 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 411 | 43.10 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 412 | 43.10 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 415 | 43.10 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 420 | 43.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 424 | 43.11 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 430 | 43.13 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 432 | 43.13 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 433 | 43.13 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 435 | 43.13 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 452 | 43.19 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 462 | 43.20 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 545 | 43.31 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 549 | 43.31 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 555 | 43.32 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 16 |
| 557 | 43.32 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 615 | 43.36 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 16 |
| 618 | 43.36 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 622 | 43.38 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 6 |
| 627 | 43.39 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 8 |
| 629 | 43.39 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 672 | 43.48 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 12 |
| 685 | 43.49 | wind | 1.0 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 723 | 43.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 728 | 43.55 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 17 |
| 808 | 43.57 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 17 |
| 811 | 43.57 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 17 |
| 824 | 43.59 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 838 | 43.60 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 863 | 43.64 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 996 | 43.67 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 3 |